Protein Alignment Chmp1 and Vps2

DIOPT Version :10

• Sequence 1: NP_649051.3
• Gene: Chmp1 / 40036
• FlyBaseID: FBgn0036805
• Length: 203
• Species: Drosophila melanogaster
• Sequence 2: NP_651455.1
• Gene: Vps2 / 43164
• FlyBaseID: FBgn0039402
• Length: 256
• Species: Drosophila melanogaster
• Alignment Length: 241
• Identity: 61/241 - (25%)
• Similarity: 111/241 - (46%)
• Gaps: 45/241 - (18%)

  Fly     6 MEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRM 70
            :.|:...|..|:::|:|...|.|::||...|..||..::|.||..:|.|::.:|.:..|..::.|
  Fly    15 LRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKDLVRTRRYAKKFMLM 79

  Fly    71 SARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVME 135
            .|.:.||:.::|:..:...:..:|.||.|||....:.:||.:|..:::.||.|.|.:|::..::.
  Fly    80 KANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMIN 144

  Fly   136 GTMSDTVTTSVPQGDVDNLLQQVADEAGLELNM---ELPSGVQSQSV------------------ 179
            ..:.|.:.....:.:.|.::.||.||.||:|..   :|||...|.|:
  Fly   145 DAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSASGSLSIAGGAGAQKAQAVAAGGVG 209

  Fly   180 ------------------------GASTAVSQEQDELTQRLARLRQ 201
                                    |||:.:|....:|..||.:||:
  Fly   210 GGGAAGGGGASGGGAGGPGAPGGSGASSPMSDADADLQARLDKLRK 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chmp1	NP_649051.3	Snf7	<42..172	CDD:460896	36/132 (27%)
Vps2	NP_651455.1	Snf7	17..185	CDD:460896	49/167 (29%)