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Protein Alignment Chmp1 and chmp3

DIOPT Version :9

Sequence 1:	NP_001287108.1	Gene:	Chmp1 / 40036	FlyBaseID:	FBgn0036805	Length:	203	Species:	Drosophila melanogaster
Sequence 2:	NP_998485.1	Gene:	chmp3 / 406621	ZFINID:	ZDB-GENE-040426-2600	Length:	221	Species:	Danio rerio

Alignment Length:	221	Identity:	56/221 - (25%)
Similarity:	101/221 - (45%)	Gaps:	41/221 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 KHLFN-----LKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNY 67
            |.|.|     ::..::.::|..:..::||:..|...|.|.:||..||..|.|:..|:.| :|:|.
Zfish    13 KDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSK-RAINK 76

  Fly    68 LRMS-ARVDAVASRVQSALTTRKVTGSM---AGVVKAM---------DAAMKGMNLE--KISSLM 117
            |..| |::::|...:::.|:..:|.|::   ..|:|||         .|.|:.::.|  |...:.
Zfish    77 LYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIE 141

  Fly   118 EKFESQFEDLDVQSSVMEGTMS--DTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVG 180
            |..|...|.:|.:..:.|...:  |.:...:..|.:.....:|.|         ||..|   ::|
Zfish   142 EMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGALGKAPSKVTD---------LPDPV---AIG 194

  Fly   181 ASTAVSQEQ------DELTQRLARLR 200
            |:.|..:|.      :|:..|||.||
Zfish   195 ATAAPEEESEEEEEIEEMQSRLAALR 220

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.