DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chmp1 and did2

DIOPT Version :9

Sequence 1:NP_001287108.1 Gene:Chmp1 / 40036 FlyBaseID:FBgn0036805 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_596562.2 Gene:did2 / 2539670 PomBaseID:SPBC13G1.12 Length:200 Species:Schizosaccharomyces pombe


Alignment Length:198 Identity:99/198 - (50%)
Similarity:136/198 - (68%) Gaps:1/198 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYL 68
            |::|..||.||||.|.|.:.|.|..|||:.|:.|.||||.|||.::|||:|.||||::.:::|.|
pombe     2 SNLEASLFQLKFAAKSLNKQSLKAAKEERAEREKVKKAITKGNSEIARIYASNAIRKQQESLNLL 66

  Fly    69 RMSARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSV 133
            ::|:|:|||:||:|:|:|.|.|:|:|||||:.||.|||.||||.||.:|:|||:||:|::||:..
pombe    67 KLSSRIDAVSSRLQTAVTMRAVSGNMAGVVRGMDRAMKTMNLEMISQVMDKFEAQFDDVNVQTGY 131

  Fly   134 MEGTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGAST-AVSQEQDELTQRLA 197
            |...|........||.|||.|:|.||||||||.|..:.:.:...:....| |...|.|.|.:||.
pombe   132 MNKAMGSVTAVDTPQEDVDLLMQTVADEAGLEFNQNMNNNLSVPAASVPTPAAPVEDDNLQERLR 196

  Fly   198 RLR 200
            .||
pombe   197 ALR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chmp1NP_001287108.1 Snf7 42..>167 CDD:419749 69/124 (56%)
did2NP_596562.2 Did4 15..200 CDD:227778 91/185 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 174 1.000 Domainoid score I865
eggNOG 1 0.900 - - E1_COG5491
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22046
Inparanoid 1 1.050 191 1.000 Inparanoid score I1046
OMA 1 1.010 - - QHG53616
OrthoFinder 1 1.000 - - FOG0001910
OrthoInspector 1 1.000 - - oto101649
orthoMCL 1 0.900 - - OOG6_100996
Panther 1 1.100 - - LDO PTHR10476
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R315
SonicParanoid 1 1.000 - - X3097
TreeFam 1 0.960 - -
1413.860

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