Protein Alignment Chmp1 and vps-2

DIOPT Version :9

• Sequence 1: NP_001287108.1
• Gene: Chmp1 / 40036
• FlyBaseID: FBgn0036805
• Length: 203
• Species: Drosophila melanogaster
• Sequence 2: NP_496717.1
• Gene: vps-2 / 174908
• WormBaseID: WBGene00012903
• Length: 237
• Species: Caenorhabditis elegans
• Alignment Length: 215
• Identity: 59/215 - (27%)
• Similarity: 105/215 - (48%)
• Gaps: 26/215 - (12%)

  Fly    13 LKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRMSARVDAV 77
            |..|::||:|...:.|.:||...|..|...:|..||..::.|::.:|.:.....::.|.|.:.||
 Worm    22 LNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVKVMAKDLVRTRRYIKKFIVMKANIQAV 86

  Fly    78 ASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMSDTV 142
            :.:||:..:...:..:|.||.|||.:..:.:||.:|..:|.:||.|.|.:|::..||...:.|.:
 Worm    87 SLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQKIMMEFEKQSEIMDMKEEVMGDAIDDAL 151

  Fly   143 TTSVPQGDVDNLLQQVADEAGLELNME---LPS-------------GVQSQSVGASTAV------ 185
            ..:..:.:.|.::.||.||.|:::..|   |||             |.|:.:.|.|...
 Worm   152 GDAGDEEETDQIVNQVLDELGIQMGEEMAGLPSAAGGLNAGGERIGGRQAVAAGGSGGAHHGAGG 216

  Fly   186 ----SQEQDELTQRLARLRQ 201
                :...|:|..||.:||:
 Worm   217 AGGGNDVDDDLQARLDQLRR 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chmp1	NP_001287108.1	Snf7	42..>167	CDD:419749	35/124 (28%)
vps-2	NP_496717.1	Snf7	17..186	CDD:281366	49/163 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5491
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810