DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chmp1 and did-2

DIOPT Version :9

Sequence 1:NP_001287108.1 Gene:Chmp1 / 40036 FlyBaseID:FBgn0036805 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_490974.1 Gene:did-2 / 171801 WormBaseID:WBGene00017735 Length:205 Species:Caenorhabditis elegans


Alignment Length:199 Identity:114/199 - (57%)
Similarity:158/199 - (79%) Gaps:1/199 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVN 66
            |:.::|||||:||||.|:||:|:::|||:||:||.|...||:|||.:||::|||||||:||:|||
 Worm     6 SSMALEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAVN 70

  Fly    67 YLRMSARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQS 131
            |::|:||:||||:|||:|.|.::||.||:||||||::|||.|||||:..||::||..||||||.:
 Worm    71 YIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFEDLDVTT 135

  Fly   132 SVMEGTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGASTAVSQEQDELTQRL 196
            ..||.||..|...:.|:..||.|:.:.||:||:|||.||||.|.:.....:.|||:::| ||:||
 Worm   136 KTMEKTMDGTTVLNAPKSQVDALIAEAADKAGIELNQELPSNVPTALPTGTQAVSEDKD-LTERL 199

  Fly   197 ARLR 200
            |.||
 Worm   200 AALR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chmp1NP_001287108.1 Snf7 42..>167 CDD:419749 73/124 (59%)
did-2NP_490974.1 Snf7 16..181 CDD:304451 97/164 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156091
Domainoid 1 1.000 202 1.000 Domainoid score I1745
eggNOG 1 0.900 - - E1_COG5491
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22046
Inparanoid 1 1.050 232 1.000 Inparanoid score I2184
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53616
OrthoDB 1 1.010 - - D1441797at2759
OrthoFinder 1 1.000 - - FOG0001910
OrthoInspector 1 1.000 - - oto17604
orthoMCL 1 0.900 - - OOG6_100996
Panther 1 1.100 - - LDO PTHR10476
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R315
SonicParanoid 1 1.000 - - X3097
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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