DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and CRR1

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_013314.1 Gene:CRR1 / 850910 SGDID:S000004203 Length:422 Species:Saccharomyces cerevisiae


Alignment Length:490 Identity:102/490 - (20%)
Similarity:149/490 - (30%) Gaps:193/490 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LAQPLPVCN-----LGGEYRPR---GCSPGDDDFTDDNQLSTEDSALEPTAPSVCEP-SESQVSP 164
            :.|.:||..     ||..|:|:   .|||.:..               |.....|.| :|....|
Yeast     5 ILQLVPVVGYIGFALGELYKPKNSISCSPNNPC---------------PAEWPCCSPYNECGAGP 54

  Fly   165 QIGVSICKGQLLFEETFDQ--------LNESLWIHDVRLPLDSKDAEFVL-YDGKAKVHDGN--- 217
                 ||.|......:||:        |..|..:..|..|   |..:|:: |..|..:.:||   
Yeast    55 -----ICVGGCNVRSSFDEESCAPIPALVASQKLEFVSTP---KVPKFIVNYQPKPPIREGNGPN 111

  Fly   218 ------LVIEPLLWSS---------YRPDLSIANSRLDLSERCTGTHNRIKECILHSTGSGPSG- 266
                  .|:|..|.|.         ..||...|...|   |....||:.      :::....|| 
Yeast   112 KANTKVGVVEGELNSKRIIHYAKFLVTPDSKEAEKML---EDFDFTHSG------YTSIEASSGN 167

  Fly   267 ---IMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDWIVPLLLL------EPLTEWYG------Q 316
               .||...|..:.| .|.:|.||:..:|.|..:...:|....|      |...||.|      |
Yeast   168 IVLAMPKKTTGSLIT-STRSFLYGKASVRMKTARSRGVVTAFDLTSAIGDEIDFEWLGGDLMTAQ 231

  Fly   317 SGYES-GQLRVALARGNSVLRMPRGKLVDGRSLYGGPVLSTDAHQREDLWLSKRKISHFGDDFHT 380
            |.|.| |.|..     ..:.|.|.|                     .|.|.:          :||
Yeast   232 SNYYSQGHLDY-----TRMQRFPVG---------------------ADTWAT----------YHT 260

  Fly   381 YSLDWSSNRLLFSVDGQVYGEMLNGFT--ELDENPRWKQGGPMAPFDKMFYISLGVS-------- 435
            |.:||..:|:::.|||::...:|...|  .:.:..|:    |..|......:..|.|        
Yeast   261 YEIDWDPDRIIWYVDGKIARTVLKKDTWDPISKEYRY----PQTPMRLEIAVWPGGSETNGPGTI 321

  Fly   436 --VGGF------------GDFVDHLRTATYEKPWAN----------------------------- 457
              .||.            |.|..|:...|. .|:.|                             
Yeast   322 NWAGGLIDWENSPDIIEKGQFTAHVEQITV-TPYQNKFTEQVQFCIKAKKKAPTFSQKDLSRVVV 385

  Fly   458 -YHPQAKLQFHQAQ------------DQWLPTWKQ 479
             |:.|.:|..|...            :.||.:||:
Yeast   386 SYNRQDRLNHHDEGSLKWDCFVTPKINDWLSSWKR 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924 6/19 (32%)
GH16_beta_GRP 175..491 CDD:185688 84/415 (20%)
CRR1NP_013314.1 ChtBD1_GH16 29..75 CDD:211314 13/65 (20%)
GH16_fungal_CRH1_transglycosylase 143..354 CDD:185692 56/261 (21%)

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