DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and XTH26

DIOPT Version :9

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_194614.1 Gene:XTH26 / 829006 AraportID:AT4G28850 Length:292 Species:Arabidopsis thaliana


Alignment Length:69 Identity:14/69 - (20%)
Similarity:26/69 - (37%) Gaps:22/69 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 FHTYSLDWSSNRLLFSVDG----------------------QVYGEMLNGFTELDENPRWKQGGP 420
            ||.|::.|:.:.:::.|||                      :|:..:.|......:..|.|....
plant   143 FHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWT 207

  Fly   421 MAPF 424
            :|||
plant   208 LAPF 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..126 CDD:292510
GH16_beta_GRP 175..491 CDD:185688 14/69 (20%)
XTH26NP_194614.1 PLN03161 1..292 CDD:178706 14/69 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209387at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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