DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and XTH29

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_193634.1 Gene:XTH29 / 827635 AraportID:AT4G18990 Length:357 Species:Arabidopsis thaliana


Alignment Length:250 Identity:53/250 - (21%)
Similarity:92/250 - (36%) Gaps:83/250 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 DGNLVIEPLLWSSYRPDLSIANSRLDLSERCTGTHNRIKECILHSTGSGPSGIMPPIVTPRISTK 279
            :|||:..|       .|.|:   ||.|.:               .||||           .||:.
plant    50 EGNLIRSP-------DDRSV---RLLLDK---------------YTGSG-----------FISSS 78

  Fly   280 ETFAFQYGRIEIRAKLPKGDWIVPLLLLEPLTEWYGQSG----YESGQLRVALARGNSVLRMPRG 340
               .:|:|......||| |.:...:::     .:|..:|    .:..:|.:... ||        
plant    79 ---MYQHGFFSSLIKLP-GAYTAGIVV-----AFYTSNGDVFVKDHDELDIEFL-GN-------- 125

  Fly   341 KLVDGR------SLYGGPVLSTDAHQREDLWLSKRKISHFGDDFHTYSLDWSSNRLLFSVDGQVY 399
              ::|:      ::||....:....:|..||....|      :||.||:.|:..:::|.||....
plant   126 --LEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSK------EFHRYSILWTPTKIIFWVDDVPI 182

  Fly   400 GEMLNGFTELDENPRWKQGGPMAPFDKMFYISLGVSVGG-------FGDFVDHLR 447
            .|:|.   :.:.|..:.| .||:.:..::..|...:.||       |..||...:
plant   183 REILR---KEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFK 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924
GH16_beta_GRP 175..491 CDD:185688 53/249 (21%)
XTH29NP_193634.1 LamG 40..312 CDD:473984 53/249 (21%)
Blue background indicates that the domain is not in the aligned region.

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