DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GNBP1 and LOC1280307

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_061510737.1 Gene:LOC1280307 / 1280307 VectorBaseID:AGAMI1_002167 Length:512 Species:Anopheles gambiae


Alignment Length:511 Identity:148/511 - (28%)
Similarity:227/511 - (44%) Gaps:61/511 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TTAYKIPTPTVELLE-TGFSVSIPDEEGVKVVAFNVNRNRNFTSFINEGQYNVRLTEPQNGRWTT 80
            ::.|:.|.|..|:.: .|..|.|..:.|:....|:...|:.|....:.|::...:.:.:|||:..
Mosquito    24 SSRYQPPKPRFEVFDPKGLIVWINADPGISSFTFHGKLNQQFVQNYDVGRWAQTIIKIKNGRYLF 88

  Fly    81 NFSSVPLRSQDVLYLWTSVQHQKAVY------------QDLAQPLPVCNLG-------GEYRPRG 126
            ......|...|.::..|.:......|            :..|.|.|....|       .|..|..
Mosquito    89 IDREAKLVPGDTIFYRTVIVRNGQTYRTNSGAFTVEELRPAATPSPTSTSGIVSRSATSELYPYV 153

  Fly   127 CSPGDDDFTDDNQLSTEDSALEPTAPSVCEPSESQVSPQIGVSICKGQLLFEETFDQLNESL--W 189
            .:..:....|....:|:....|..:...|..:::.|:   |..:|.|:||||:.|:..:..|  |
Mosquito   154 LTANERRTKDVRSTATQTDDYEGNSAEHCANAQTIVN---GRKVCAGKLLFEDNFNGRSIDLRKW 215

  Fly   190 IHDVRLPLDSKDAEFVLY---DGKAKVHDGNLVIEPLLW-SSYRPDLSIANSRLDLSERCTGTHN 250
            ..:.|...| .|.|||:|   .....:.:|.|.|.|.|: ..:.|..:....|  ..|.||| |:
Mosquito   216 RIENRFASD-PDNEFVVYADFPENIMIQNGLLAIRPTLFEEKFGPGATTQQFR--FGEECTG-HS 276

  Fly   251 RIKECILHSTGSGPSGIMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDWIVPLLLLEPLTEWYG 315
            ..::||..:  .....::||::|.:|:|..:|.|.:|::.||||||:|.||.|.|.:.|.|::||
Mosquito   277 SSRDCIRDT--KIDFDMIPPVLTAQITTITSFKFTFGKVLIRAKLPEGSWIFPQLYIIPATDFYG 339

  Fly   316 QSGYESGQLRVALARGNSVLRMPRGKLVDGRSLYGGPVLSTDAHQREDLWLSKRKISHFGDDFHT 380
            |..|.||.:|:|...|....|         ..|.||.::|.....|.....:..|...:..|:|.
Mosquito   340 QDSYASGLMRIAFVPGGPQFR---------NQLSGGLLVSDSEPLRCSKMCTLNKNVQWSSDYHV 395

  Fly   381 YSLDWSSNRLLFSVDGQVY-----GEMLNGFTELDENPR----WK-QGGPMAPFDKMFYISLGVS 435
            |.|.|:...:...||.:||     ||.|.. |.....|:    |: .|..||||||.||:.|||.
Mosquito   396 YGLKWTPEGVWMEVDDEVYCAIDPGEGLYR-TIQSRKPQIANLWQLSGSRMAPFDKDFYLGLGVG 459

  Fly   436 VGGFGDFVDHLRTATYEKPWANYHPQAKLQFHQAQDQWLPTWK-QPALKIDYVRVF 490
            |||..||  |....   |||.:...:|...|.:|:|:|.|||. ...:.:||||||
Mosquito   460 VGGHYDF--HQFNG---KPWKDLGVKAMFTFWKARDKWYPTWNVNSTMLVDYVRVF 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924 23/122 (19%)
GH16_beta_GRP 175..491 CDD:185688 115/333 (35%)
LOC1280307XP_061510737.1 None

Return to query results.
Submit another query.