DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and LOC1274601

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_313747.2 Gene:LOC1274601 / 1274601 VectorBaseID:AGAMI1_002793 Length:395 Species:Anopheles gambiae


Alignment Length:390 Identity:120/390 - (30%)
Similarity:177/390 - (45%) Gaps:63/390 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 EDSALEPTAPSVCEPSESQVSPQI---GVSICKGQLLFEETFDQLNESLWIHDVRLPLDSKDAEF 204
            |.::...||.|.|..|.:..|..:   |.:.|.|:|:||:|||..:...|.|:..| ....:.||
Mosquito    27 EPTSTASTAQSECVRSVTTASGSLIDRGRTFCSGELIFEDTFDFFDFEKWEHENTL-AGGGNWEF 90

  Fly   205 VLYDGKAK---VHDGNLVIEPLLWSSYRPDLSIANSRLDLSERCTGTHNRIKECILHSTGSGPSG 266
            ..|.....   |.||.|.|.|.|.:          .:..|....:||        |...||.|:.
Mosquito    91 QWYTNNRSNSFVEDGALNIRPTLTA----------DQFGLDFMTSGT--------LSLQGSYPTD 137

  Fly   267 ------------------IMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDWIVPLLLLEPLTEW 313
                              |:.|:.:.||.|..:|.|:|||.|:|||||.|||:.|.:.|.|....
Mosquito   138 HCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGRAEVRAKLPTGDWLWPAIWLLPKRNA 202

  Fly   314 YGQSGYESGQLRVALARGNSVLRMPR---GKLVDGRSLYGGPVLSTDAHQREDLWLSKRKISHFG 375
            || :...||::.:..:|||..|.:..   |....|::|:.||..|.:.:....|..:......|.
Mosquito   203 YG-TWPASGEMDLMESRGNENLYLDGVQIGTRQVGQTLHFGPNPSYNGYPTATLTKNALPEQEFS 266

  Fly   376 DDFHTYSLDWSSNRLLFSVDGQ----VYGEM--LNGFTELD-ENPRWKQGGPMAPFDKMFYISLG 433
            ..|.|:...|:.:.:..|::|:    :.|:.  ..||.:.: ||| |:.|..|||||:.|:..:.
Mosquito   267 KSFSTFGFVWTPDNITVSINGEDLATIGGDFWTRGGFDKHNLENP-WRHGTRMAPFDQEFHFIIN 330

  Fly   434 VSVGGFGDFVDHLRTATYEKPWANYHPQAKLQFHQAQDQWLPTW-------KQPALKIDYVRVFA 491
            ::|||...|.| ..|....|||.|..|||...|...:.||||||       |..:|.:|||:|:|
Mosquito   331 LAVGGVAFFPD-AATNPGGKPWKNNSPQAATDFWNGRAQWLPTWNLERDGGKSASLLVDYVKVWA 394

  Fly   492  491
            Mosquito   395  394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924
GH16_beta_GRP 175..491 CDD:185688 109/353 (31%)
LOC1274601XP_313747.2 None
Blue background indicates that the domain is not in the aligned region.

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