DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and LOC1273166

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_312118.5 Gene:LOC1273166 / 1273166 VectorBaseID:AGAMI1_014781 Length:414 Species:Anopheles gambiae


Alignment Length:397 Identity:128/397 - (32%)
Similarity:187/397 - (47%) Gaps:51/397 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GDDDFTDDNQLSTEDSALEPTAPSVCEPSESQVSPQIGV-----SICKGQLLFEETFDQLNESLW 189
            ||||..:      ..|..:..||..|:  .:.|:...|.     :.|.|.|:||:.||:|:...|
Mosquito    33 GDDDEVE------RPSVPDGEAPLACD--RASVTTASGTLVKRSAFCPGDLIFEDNFDRLDLERW 89

  Fly   190 IHDVRLPLDSKDAEFVLYDGKAK---VHDGNLVIEPLLWSSYRPDLSIANSRLDLS-----ERCT 246
            .|:|.| ....:.||..|....:   |.||...|.|.|.:....:..:::..|::.     :.||
Mosquito    90 QHEVTL-AGGGNWEFQYYLNSRRNSFVKDGIFFIRPTLLADETGEEFLSSGNLNVHGGTPYDFCT 153

  Fly   247 GTHNRIKECILHSTGSGPSGIMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDWIVPLLLLEPLT 311
            ...|...|    ..|| |:..:.||.:.|:.|..:|.|:||::|||||:|.|||:.|.|.|.|..
Mosquito   154 NPSNYGCE----RQGS-PTNYLNPIKSARVRTVNSFNFRYGKVEIRAKIPTGDWLWPALWLMPKI 213

  Fly   312 EWYGQSGYESGQLRVALARGN---SVLRMPRGKLVDGRSLYGGPVLSTDAHQREDLWLSKRKISH 373
            ..|| :...||::.:..:|||   ||.....|....|.:|:.||....:.::......:..|...
Mosquito   214 NQYG-TWPSSGEIDLMESRGNLDYSVNGNQLGVEHVGTTLHFGPQWDLNGYEMATAVKNSPKGQG 277

  Fly   374 FGDDFHTYSLDWSSNRLLFSVDGQVYGEMLNGFTEL---DE------NPRWKQGGPMAPFDKMFY 429
            |...||.|.|:|:...:.||||.:...::...|.||   ||      || |..||.|||||:.||
Mosquito   278 FNKGFHRYQLEWTPEFMRFSVDDEQVMQVEGNFWELGRFDERRPGVQNP-WVTGGKMAPFDQEFY 341

  Fly   430 ISLGVSVGGFGDF---VDHLRTATYEKPWANYHPQAKLQFHQAQDQWLPTWK-------QPALKI 484
            |.:.::|||...|   |.....|...|||:|..|.|...|...:..||||||       :.:.::
Mosquito   342 IIMNLAVGGTNGFFPDVPPAVNANGNKPWSNNSPTALRDFWLGRSDWLPTWKLQENDSAEASFQV 406

  Fly   485 DYVRVFA 491
            |||||:|
Mosquito   407 DYVRVWA 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924
GH16_beta_GRP 175..491 CDD:185688 115/345 (33%)
LOC1273166XP_312118.5 None
Blue background indicates that the domain is not in the aligned region.

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