DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP1 and LOC1273164

DIOPT Version :10

Sequence 1:NP_524142.2 Gene:GNBP1 / 40034 FlyBaseID:FBgn0040323 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_312116.5 Gene:LOC1273164 / 1273164 VectorBaseID:AGAMI1_003523 Length:391 Species:Anopheles gambiae


Alignment Length:385 Identity:115/385 - (29%)
Similarity:184/385 - (47%) Gaps:52/385 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 ALEPTAP--SVCEPSESQVSPQIGVSICKGQLLFEETFDQLNESLWIHDVRLPLDSKDAEFVLY- 207
            |||..:|  :|...:.|....:.| ..|.|:|:||:.|:.|:...|.|:..|. ...:.||..| 
Mosquito    19 ALEEQSPKCTVSVTTASGTKARAG-PYCTGELIFEDNFNTLDFETWEHENTLS-GGGNWEFQWYL 81

  Fly   208 --DGKAKVHDGNLVIEPLLWSSYRPDLSIANSRLDL-----SERCTGTHNRIKECILHSTGSGPS 265
              ...:...:|...|.|.|.:....:..:::..|::     :::||..  ....|  ..||| |:
Mosquito    82 NHRSNSYCENGIFYIRPTLLADDTGEAFLSSGTLNIHGGQPADQCTSA--MFWGC--ERTGS-PT 141

  Fly   266 GIMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDWIVPLLLLEPLTEWYGQSGYESGQLRVALAR 330
            .::.||.:.|:.|..:|.|:|||:|:||::|.|||:.|.:.|.|..:.|| :...||::.:..:|
Mosquito   142 NLINPIKSARVRTVNSFNFKYGRMEVRARMPTGDWLWPAVWLLPKRQVYG-TWPASGEIDLLESR 205

  Fly   331 GNSVLRMPRGKLVD----GRSLYGGPVLSTDAHQREDLWLSKRKISHFGDDFHTYSLDWSSNRLL 391
            ||...|...|..:.    |.:|:.||..|.:..:....:.:......:...||.|.|.|:.:.:.
Mosquito   206 GNMDYRGSNGVHIGTEQFGSTLHFGPNPSLNGWESTVAYKNTAAGQGWNTGFHNYQLTWTPDYIR 270

  Fly   392 FSVDGQV---------------YGEMLNGFTELDENPRWKQGGPMAPFDKMFYISLGVSVGGFGD 441
            ||||.|:               :|.:..|    .||| |..|..|||||:.|||.:.::|||...
Mosquito   271 FSVDNQLVTQIDAGTGFWNRGNFGNIAPG----TENP-WIHGTRMAPFDQEFYIIMNLAVGGTNG 330

  Fly   442 FVDHLRTAT---YEKPWANYHPQAKLQFHQAQDQWLPTW-------KQPALKIDYVRVFA 491
            :...:..|:   ..|||:|..|.|...|...::.|||||       |..:|:||||||:|
Mosquito   331 YFPDVPPASNGNRGKPWSNNSPTAARDFWNGRNSWLPTWRMTDNRGKDSSLQIDYVRVWA 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP1NP_524142.2 CBM39 21..124 CDD:464924
GH16_beta_GRP 175..491 CDD:185688 105/352 (30%)
LOC1273164XP_312116.5 None
Blue background indicates that the domain is not in the aligned region.

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