DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and UTR2

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_010874.3 Gene:UTR2 / 856671 SGDID:S000000766 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:208 Identity:36/208 - (17%)
Similarity:67/208 - (32%) Gaps:66/208 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 GSFKLGDRCTAVESPEQECNIAHGIFYSIKPPV------------FSAQIHTRNSFSFKFGKIVV 278
            |....|..|.      ..|::.:...:....||            :|:::...|:|   .|.:  
Yeast    44 GECGTGQYCL------NNCDVRYSFSHDSCMPVPICKSSSTKFKDYSSKLGNANTF---LGNV-- 97

  Fly   279 RAKLPKGDWLF----------PYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQ-GDDISGNH 332
                .:.|||:          ..|:|........|..:....:.|.:.:|.::|.. ...::|..
Yeast    98 ----SEADWLYTGDVLDYDDEESLILAMPKNSGGTVLSSTRAVWYGKVSARIKTSHLAGVVTGFI 158

  Fly   333 LYGGG-----------------------VVWHHGNAVQFLKDKISNSHYGDDFHNYTMIWQRDKI 374
            ||.|.                       .|.::.|:.     .||.:...:::|.|.:.|..|.:
Yeast   159 LYSGAGDELDYEFVGADLETAQTNFYWESVLNYTNSA-----NISTTDTFENYHTYELDWHEDYV 218

  Fly   375 TLMVDDEVYGELY 387
            |..:|..|...||
Yeast   219 TWSIDGVVGRTLY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 36/208 (17%)
UTR2NP_010874.3 ChtBD1_GH16 25..71 CDD:211314 5/32 (16%)
GH16_fungal_CRH1_transglycosylase 91..302 CDD:185692 29/155 (19%)
Blue background indicates that the domain is not in the aligned region.

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