DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and CRR1

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_013314.1 Gene:CRR1 / 850910 SGDID:S000004203 Length:422 Species:Saccharomyces cerevisiae


Alignment Length:326 Identity:64/326 - (19%)
Similarity:102/326 - (31%) Gaps:131/326 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 VKEGELH---IVPTIATEVTDGSFKLGDRCTAVESPEQECNIAHGIFYSIK----------PPVF 259
            |.||||:   |:......||..|       ...|...::.:..|..:.||:          |...
Yeast   119 VVEGELNSKRIIHYAKFLVTPDS-------KEAEKMLEDFDFTHSGYTSIEASSGNIVLAMPKKT 176

  Fly   260 SAQIHTRNSFSFKFGKIVVRAKLPK--------------GD-----WLFPYLMLQPVSTYAETHY 305
            :..:.| ::.||.:||..||.|..:              ||     ||...||.      |:::|
Yeast   177 TGSLIT-STRSFLYGKASVRMKTARSRGVVTAFDLTSAIGDEIDFEWLGGDLMT------AQSNY 234

  Fly   306 AKQLRIAYARGNANLRTKQGDDISGNHLYGGGVVWHHGNAVQFLKDKISNSHYGDDFHNYTMIWQ 370
            ..|..:.|.|..   |...|.|           .|                   ..:|.|.:.|.
Yeast   235 YSQGHLDYTRMQ---RFPVGAD-----------TW-------------------ATYHTYEIDWD 266

  Fly   371 RDKITLMVDDEVYGEL--------------YDGLPFFNEKCFIIFGVTV---------------- 405
            .|:|...||.::...:              |...|...|       :.|                
Yeast   267 PDRIIWYVDGKIARTVLKKDTWDPISKEYRYPQTPMRLE-------IAVWPGGSETNGPGTINWA 324

  Fly   406 GGFLNFDDS--LLAK----------DVKPYKNREPRAALSFWQHRDAWAPTWGRH--SAMVIDYV 456
            ||.:::::|  ::.|          .|.||:|:... .:.|.......|||:.:.  |.:|:.|.
Yeast   325 GGLIDWENSPDIIEKGQFTAHVEQITVTPYQNKFTE-QVQFCIKAKKKAPTFSQKDLSRVVVSYN 388

  Fly   457 R 457
            |
Yeast   389 R 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 64/326 (20%)
CRR1NP_013314.1 ChtBD1_GH16 29..75 CDD:211314
GH16_fungal_CRH1_transglycosylase 143..354 CDD:185692 44/257 (17%)
Blue background indicates that the domain is not in the aligned region.

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