DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH30

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_174496.1 Gene:XTH30 / 840109 AraportID:AT1G32170 Length:343 Species:Arabidopsis thaliana


Alignment Length:198 Identity:40/198 - (20%)
Similarity:65/198 - (32%) Gaps:75/198 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 YAKQLRIAYARGNANLRTKQGDDIS----GN----------HLYGGGVVWHHGNAVQFLKDKISN 355
            |...:.:|:...|.::..|..|::.    ||          :|||.|.. |.|.          .
plant    87 YTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGST-HRGR----------E 140

  Fly   356 SHY------GDDFHNYTMIWQRDKITLMVDD---------------------EVYGELYDG---- 389
            ..|      ..:||.|:::|...||...|||                     .:|..::|.    
plant   141 ERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWA 205

  Fly   390 ------------LPFFNE-KCFIIFGVTVGGF----LNFDDSLLAKDVKPYK--NREPRAALSFW 435
                        .||..| |.|.:.|.:|...    ::..||:...:.:.|.  |...|||:..:
plant   206 TSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYSSINSHQRAAMRRF 270

  Fly   436 QHR 438
            :.|
plant   271 RQR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 40/198 (20%)
XTH30NP_174496.1 GH16_XET 28..293 CDD:185685 40/198 (20%)
Blue background indicates that the domain is not in the aligned region.

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