DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH13

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_200562.1 Gene:XTH13 / 835858 AraportID:AT5G57540 Length:284 Species:Arabidopsis thaliana


Alignment Length:183 Identity:43/183 - (23%)
Similarity:65/183 - (35%) Gaps:54/183 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 FKFGKIVVRAKLPKGD---WLFPYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQGDDISGNH 332
            :.||||.::.||..|:   .:..|.:.....|:.|..:.       ..||.   |.|...:..|.
plant    66 YLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFE-------FLGNV---TGQPYVLHTNV 120

  Fly   333 LYGGGVVWHHGN-AVQFLK--DKISNSHYGDDFHNYTMIWQRDKITLMVDDEVYGELYDGLPFFN 394
            ..||     .|| .:||..  |..:      |||.||::|....|..:||               
plant   121 FTGG-----KGNREMQFYLWFDPTA------DFHTYTVLWNPLNIIFLVD--------------- 159

  Fly   395 EKCFIIFGVTVGGFLNFDDSLLAKDVKPYKNREPRAALSFWQHRDAWAPTWGR 447
                   |:.:..|.|.:    |..|...|::..:...|.|: .|.||...|:
plant   160 -------GIPIRVFKNNE----ANGVAYPKSQPMKIYSSLWE-ADDWATQGGK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 43/183 (23%)
XTH13NP_200562.1 GH16_XET 23..281 CDD:185685 43/183 (23%)
Blue background indicates that the domain is not in the aligned region.

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