DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH12

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_200561.1 Gene:XTH12 / 835857 AraportID:AT5G57530 Length:285 Species:Arabidopsis thaliana


Alignment Length:228 Identity:52/228 - (22%)
Similarity:79/228 - (34%) Gaps:74/228 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 IAHGIFYSI--------KPPVF-SAQIHT-----------RNSFSFKFGKIVVRAKLPKGD---W 287
            :|.|.||..        :..:| |.|:.|           ::...:.||||.::.||..|:   .
plant    22 VATGSFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGT 86

  Fly   288 LFPYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQGDDISGNHLYGGGVVWHHGN-AVQFLK- 350
            :..|.:.....|:.|..:.       ..||.   |.|...|..|...||     .|| .:||.. 
plant    87 VTAYYLSSKGETWDEIDFE-------FLGNV---TGQPYVIHTNVFTGG-----KGNREMQFYLW 136

  Fly   351 -DKISNSHYGDDFHNYTMIWQRDKITLMVDDEVYGELYDGLPFFNEKCFIIFGVTVGGFLNFDDS 414
             |..:      |||.||::|....|..:||                      |:.:..|.|.:  
plant   137 FDPTA------DFHTYTVLWNPLNIIFLVD----------------------GIPIRVFKNNE-- 171

  Fly   415 LLAKDVKPYKNREPRAALSFWQHRDAWAPTWGR 447
              |..|...|::..:...|.|: .|.||...|:
plant   172 --ANGVAYPKSQPMKIYSSLWE-ADDWATQGGK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 52/228 (23%)
XTH12NP_200561.1 GH16_XET 23..282 CDD:185685 52/227 (23%)
Blue background indicates that the domain is not in the aligned region.

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