DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH5

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_196891.1 Gene:XTH5 / 831233 AraportID:AT5G13870 Length:293 Species:Arabidopsis thaliana


Alignment Length:230 Identity:51/230 - (22%)
Similarity:79/230 - (34%) Gaps:71/230 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 PEQECNIAHG-------IFYSIKPPVFSAQIH------TRNSF----SFKFGKIVVRAKLPKGD- 286
            |::..|:..|       .|..||.....:::|      |...|    |:.||...:..|:..|| 
plant    24 PKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDS 88

  Fly   287 --WLFPYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQGDDISGNHLYGGGVVWHHGNAVQFL 349
              .:..:.:....|.:.|..:.       ..||   ||.|...:..|...||.     ||..|.:
plant    89 AGTVTAFYLSSQNSEHDEIDFE-------FLGN---RTGQPYILQTNVFTGGA-----GNREQRI 138

  Fly   350 KDKISNSHYGDDFHNYTMIWQRDKITLMVDDEVYGELYDGLPFFNEKCFIIFGVTVGGFLNFDDS 414
            ......|   .|:|:|:::|...:|...|||                      |.:..|.|    
plant   139 NLWFDPS---KDYHSYSVLWNMYQIVFFVDD----------------------VPIRVFKN---- 174

  Fly   415 LLAKDVK---PYKNREPRAALSFWQHRDAWAPTWG 446
              :|||.   |: |:..:...|.| :.|.||...|
plant   175 --SKDVGVKFPF-NQPMKIYSSLW-NADDWATRGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 51/230 (22%)
XTH5NP_196891.1 GH16_XET 30..287 CDD:185685 49/224 (22%)
Blue background indicates that the domain is not in the aligned region.

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