DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH18

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_194757.1 Gene:XTH18 / 829151 AraportID:AT4G30280 Length:282 Species:Arabidopsis thaliana


Alignment Length:265 Identity:54/265 - (20%)
Similarity:85/265 - (32%) Gaps:87/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LVAFDDAARNCFVKEGELHIVPTIATEVTDGSFKLGDRCTAVESPEQECNIAHGIFYSIKPPVFS 260
            |:.|..||::..|..|..|  ..:.....||..|:.||...:.|...:.:...|.          
plant    12 LIMFLFAAQSMHVYAGSFH--KDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGF---------- 64

  Fly   261 AQIHTRNSFSFKFGKIVVRAKLPKGD---WLFPYLMLQPVSTYAETHYAKQLRIAYARGN----- 317
                 :::..|.:||..|:.||..|:   .:..:.:..|.:|:.|..:.       ..||     
plant    65 -----QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFE-------FLGNLSGHP 117

  Fly   318 ----ANLRTK-QGDDISGNHLYGGGVVWHHGNAVQFLKDKISNSHYGDDFHNYTMIWQRDKITLM 377
                .|:.|| .||.....||:....|                     :||.|.:.|...:|...
plant   118 YTLHTNVYTKGSGDKEQQFHLWFDPTV---------------------NFHTYCITWNPQRIIFT 161

  Fly   378 VDDEVYGELYDGLPFFNEKCFIIFGVTVGGFLNFDDSLLAKDVKPYKNREP-RAALSFWQHRDAW 441
            |         ||:|....|.....||                  |:..::| |...|.|: .:.|
plant   162 V---------DGIPIREFKNSESIGV------------------PFPTKQPMRLYASLWE-AEHW 198

  Fly   442 APTWG 446
            |...|
plant   199 ATRGG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 54/265 (20%)
XTH18NP_194757.1 LamG 25..281 CDD:473984 49/252 (19%)
Blue background indicates that the domain is not in the aligned region.

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