DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH9

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_192230.1 Gene:XTH9 / 828024 AraportID:AT4G03210 Length:290 Species:Arabidopsis thaliana


Alignment Length:238 Identity:53/238 - (22%)
Similarity:82/238 - (34%) Gaps:87/238 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 FKFGKIVVRAKLPKGDWLFPYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQGDDISGN---- 331
            :.|||:.::.||.:||                  .|..:...|...:.....:...:..||    
plant    67 YLFGKVSIQIKLVEGD------------------SAGTVTAFYMSSDGPNHNEFDFEFLGNTTGE 113

  Fly   332 ------HLYGGGVVWHHGNAVQFLK---DKISNSHYGDDFHNYTMIWQRDKITLMVDD---EVYG 384
                  ::|..||    ||..|.|.   |..:      :||.|:::|.:..:..|||:   .|..
plant   114 PYIVQTNIYVNGV----GNREQRLNLWFDPTT------EFHTYSILWSKRSVVFMVDETPIRVQK 168

  Fly   385 ELYD-GLPFFNEKCFIIFG--------VTVGGFLNFDDSLLAKDVKPYKNREPRAA-------LS 433
            .|.: |:||..::...::.        .|.||.:..|.| .|..|..||..:..|.       ||
plant   169 NLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWS-HAPFVASYKEFQIDACEIPTTTDLS 232

  Fly   434 -------FWQHRDAW-APT-------------WGRHSAMVIDY 455
                   ||     | .||             |.|.:.|:.||
plant   233 KCNGDQKFW-----WDEPTVSELSLHQNHQLIWVRANHMIYDY 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 53/238 (22%)
XTH9NP_192230.1 GH16_XET 25..284 CDD:185685 53/238 (22%)
Blue background indicates that the domain is not in the aligned region.

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