DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH15

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_193149.2 Gene:XTH15 / 827051 AraportID:AT4G14130 Length:289 Species:Arabidopsis thaliana


Alignment Length:188 Identity:41/188 - (21%)
Similarity:63/188 - (33%) Gaps:66/188 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 FKFGKIVVRAKLPKGD---WLFPYLMLQPVSTYAETHYAKQLRIAYARGNANLRTKQGDDISGNH 332
            :.||:|.::.||..|:   .:..|.:....:|:.|..:                     :..||.
plant    68 YLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDF---------------------EFLGNE 111

  Fly   333 LYGGGVVWHHGNAVQFLKDKISNSHYGDD----FHNYTMIWQRDKITLMVDDEVYGELYDGLPF- 392
            . |...|.|.....|...|:....:...|    ||.|:::|:...|..:||:         ||. 
plant   112 T-GKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDN---------LPIR 166

  Fly   393 -FN--EKCFIIFGVTVGGFLNFDDSLLAKDVKPYKNREP-RAALSFWQHRDAWAPTWG 446
             ||  ||    .||                  |:...:| |...|.| :.|.||...|
plant   167 VFNNAEK----LGV------------------PFPKSQPMRIYSSLW-NADDWATRGG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 41/188 (22%)
XTH15NP_193149.2 GH16_XET 23..284 CDD:185685 41/188 (22%)
Blue background indicates that the domain is not in the aligned region.

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