DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP2 and XTH3

DIOPT Version :10

Sequence 1:NP_524141.1 Gene:GNBP2 / 40033 FlyBaseID:FBgn0040322 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_189141.1 Gene:XTH3 / 822096 AraportID:AT3G25050 Length:290 Species:Arabidopsis thaliana


Alignment Length:167 Identity:38/167 - (22%)
Similarity:56/167 - (33%) Gaps:68/167 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 QLRIAYARGNAN-------LRTKQG--DDIS----GN----------HLYGGGVVWHHGNAVQ-F 348
            ::||....||..       |.:|.|  |:|.    ||          :|:..|    .||..: |
plant    81 EMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNG----EGNREERF 141

  Fly   349 LKDKISNSHYGDDFHNYTMIWQRDKITLMVDDEVYGELYDGLP---FFNEKCFIIFGVTVGGFLN 410
            |.......||    |.|.::|...:|...||:         :|   :.||.     ||:      
plant   142 LLWFNPTKHY----HTYGLLWNPYQIVFYVDN---------IPIRVYKNEN-----GVS------ 182

  Fly   411 FDDSLLAKDVKPYKNREPRAALSFWQHRDAWAPTWGR 447
                        |.::..:...|.| :.|.||...||
plant   183 ------------YPSKPMQVEASLW-NGDDWATDGGR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP2NP_524141.1 CBM39 22..120 CDD:464924
GH16_beta_GRP 165..460 CDD:185688 38/167 (23%)
XTH3NP_189141.1 GH16_XET 33..289 CDD:185685 38/167 (23%)
Blue background indicates that the domain is not in the aligned region.

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