DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bora and spat-1

DIOPT Version :9

Sequence 1:NP_649048.1 Gene:bora / 40031 FlyBaseID:FBgn0259791 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001254433.1 Gene:spat-1 / 175113 WormBaseID:WBGene00010198 Length:547 Species:Caenorhabditis elegans


Alignment Length:565 Identity:114/565 - (20%)
Similarity:190/565 - (33%) Gaps:202/565 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SAASATPTNGGKENGKYSPQMSGNVCTPPPKR----------LHKVRNPFEGAMADRLHLPLIAS 93
            |..:..|:..|.::...:||.:      .||.          .:...||.:..:.:.||..:..|
 Worm    61 SINTTDPSTSGYDSKSITPQQN------DPKLSMSAELSSFIANNSLNPLDSILLNSLHKSINFS 119

  Fly    94 PSLFRSR---TPQLSSTQFEWNIDEVSQLKPADVEPHE-TQFHDSPDPEQESKAQLAISAFFKES 154
            |.:..|:   :.|..|.:|:|:|::::.||||.:...| ...:.||.||.|.|.|..::.::.::
 Worm   120 PRVVFSQESCSQQKDSEKFQWSIEQLAILKPAHISDDEIAASYRSPIPEVEEKIQEVLNEYWTKN 184

  Fly   155 L-IVPSPVDCP------------------------------------------LRKQRIILNCSE 176
            : .:||| |.|                                          :||:..:.....
 Worm   185 VSYIPSP-DGPRYINLSHRDGTVTTFTYGAEENATSSSAPGAAAGTPASLANIVRKKEAVKAAYA 248

  Fly   177 DNTPIS-----NKSRRMRDCEVQTELTLPPILPKALEDALRPYF--QPHLAGRLSGRSKSSGGPD 234
            .::|..     ...|::|:...|||||:||.|...|:..|...|  ||       .........:
 Worm   249 TSSPKQRPRNFRNIRQVRNRPAQTELTIPPNLDLDLKKLLGEQFVYQP-------DEEDEEDDEE 306

  Fly   235 IFNSSM------RRKLFDLHNVIVLGEQDTAEPSRSMVGSSPQGKQTMFAGRLSDSASGESSFGC 293
            :||.|:      ||:||                                      ||.|      
 Worm   307 VFNVSVSSNFSTRRRLF--------------------------------------SAGG------ 327

  Fly   294 LSPIRNLCGLPPGTP----------DNGTCSGKRKLLMHELELPSPIAPSEHLSRRLVHSKVEIS 348
                      .||.|          :|.:......|:::|..       .:|.:..|  |.|...
 Worm   328 ----------TPGAPRDDEDEADDVENSSMLSNDDLMLNETN-------GQHFNDSL--SPVRKD 373

  Fly   349 VTEQHDTLSERTALKFTPDRSSSPMGGGLEHSDCSINQRVRRLRVNSTRQVVIETGDQPLFEETE 413
            ||:..|          .|:.|.:.  .|...|..:||       ::.....::.:.|:   ||.:
 Worm   374 VTDDID----------EPETSMTT--SGATASQIAIN-------ISILNDCMMNSIDE---EEID 416

  Fly   414 GEEEEAESE---------DDEEADAMQLSTVSFNCSSSNSDTPRGHKRHRSAQRKNLSQSFSANL 469
            |.|||.::|         .....||.:...:  :.|||::.|||......:.:|  ...|.::|.
 Worm   417 GNEEEGKNEAVHHQHNVFSHSHLDANEYEIL--DRSSSSNATPRHEDLDWTPRR--FPGSANSNP 477

  Fly   470 EEEADQTQGGAGSIQPAE------PPSVAMPQQGA----RIPLYR 504
            ......|.||:|...|.:      ..|...|...|    |.||.|
 Worm   478 MLRGIITSGGSGGGGPQDFRRFVFDMSPIHPNHNAPGAMRTPLQR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
boraNP_649048.1 BORA_N 60..258 CDD:317655 56/267 (21%)
spat-1NP_001254433.1 BORA_N 84..327 CDD:291928 58/288 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167781
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014409
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14728
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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