DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and USP8

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_005145.3 Gene:USP8 / 9101 HGNCID:12631 Length:1118 Species:Homo sapiens


Alignment Length:725 Identity:179/725 - (24%)
Similarity:284/725 - (39%) Gaps:140/725 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EIETRKASEKSQKFTKKKPNYFQNWAARRRTAKVAKIRRKQRKCDKAFVPLQSSAKRAKTKENSV 76
            |:..|:..|:.:|..|::.   :..|.:::.|:..:|..||:|..:.....:|...:.:.||.|.
Human   481 ELRERQQEEQKEKLRKEEQ---EQKAKKKQEAEENEITEKQQKAKEEMEKKESEQAKKEDKETSA 542

  Fly    77 DSNTSVFSSSSSSSSGRSFGRGTERWAVGAEAGRGTAENETLAVAAAAATTTNAG-RFITADLIK 140
            .                   ||.|...|..::   .:|:||   :.|..:..:.| |..|.::.|
Human   543 K-------------------RGKEITGVKRQS---KSEHET---SDAKKSVEDRGKRCPTPEIQK 582

  Fly   141 TVNSDKQRDRVAKGHRDAKNPLDATKHLRLSDCLRTVQKLAIELESADAGSDASAQANASADASS 205
            ....|.....|. |...:..|. ..|....|..|||    ....|..|......||......|.|
Human   583 KSTGDVPHTSVT-GDSGSGKPF-KIKGQPESGILRT----GTFREDTDDTERNKAQREPLTRARS 641

  Fly   206 AVMSE------TGCRHYQSYVKEHSYDTFRVIDAYFAACVNRDARERKAIHCNCFECGSYGIQLY 264
            ..|..      :|...:...:.    .|||    |:.:..|       .:|....|...      
Human   642 EEMGRIVPGLPSGWAKFLDPIT----GTFR----YYHSPTN-------TVHMYPPEMAP------ 685

  Fly   265 ACLHCIYFGCRGAHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREYALINRKLEAKDLQ 329
                     ......|......|..:..|                  |.||.:.:.|...:.|:.
Human   686 ---------SSAPPSTPPTHKAKPQIPAE------------------RDREPSKLKRSYSSPDIT 723

  Fly   330 KSI--------GWVPWV-----PT---TKETNLLLANARRRLVRPNQTIG-----LRGLLNLGAT 373
            ::|        ...|.|     ||   ..|.:.|.|:..|.|   |...|     |.||.|||.|
Human   724 QAIQEEEKRKPTVTPTVNRENKPTCYPKAEISRLSASQIRNL---NPVFGGSGPALTGLRNLGNT 785

  Fly   374 CFMNCIVQALVHTPLLSDYF----MSDRHDCGSKSSHKCLVC-EVSRLFQEFYSGSRSPLSLHRL 433
            |:||.|:|.|.:.|.|:|||    ..|..:..:...||..|. |...:.:..::|....:|....
Human   786 CYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDF 850

  Fly   434 LHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKA--KAEHESKSNSSGSGSGTNSSNSSSSH 496
            ...|.......|||.|||:.|..:..:|.||....||  :..::.::|..      .....::.|
Human   851 KITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDH------LDDFKAAEH 909

  Fly   497 C---YGQCN-CIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCL 557
            .   :.|.| .||..:|.|..:|.|.|..|:..|.|::.|..:||.|..|      :..||.|||
Human   910 AWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLAST------SKCTLQDCL 968

  Fly   558 ERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVE 622
            ..:::.|.|....:..||.|::.::|.|:..:..||.|:..|||||.:.....:|:.:.:.||:|
Human   969 RLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033

  Fly   623 -FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRH-QKDTWVKCDDHVITMASLKQV 685
             .|::.::...||...  :::|::|.||.|.:|.||||||.:: .:..|.|.|||.::..|:..|
Human  1034 NLDLSQYVIGPKNNLK--KYNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSV 1096

  Fly   686 LDSEGYLLFY 695
            ..|..|:|||
Human  1097 KSSAAYILFY 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464 4/56 (7%)
Peptidase_C19D 365..696 CDD:239125 107/344 (31%)
USP8NP_005145.3 USP8_dimer 6..116 CDD:462647
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..177
Rhodanese 192..304 CDD:425764
tolA_full 375..>547 CDD:274303 17/87 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..447
SH3-binding. /evidence=ECO:0000250 405..413
TolA 459..>656 CDD:442298 44/208 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..648 43/200 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 679..746 12/99 (12%)
UCH 777..1106 CDD:425685 105/342 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.