DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and UBP8

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_013950.1 Gene:UBP8 / 855263 SGDID:S000004836 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:518 Identity:162/518 - (31%)
Similarity:246/518 - (47%) Gaps:91/518 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 CRHYQS-YVKEHSYDTFRVIDAYFAA--CVNRDARERKAIHCNCFECGS-YGIQ---LYACLHCI 270
            |.|.|. :..|.|.|  .|:....||  .:|....:.|.:  |..:||: :.|.   .:.||.|.
Yeast     4 CPHIQQVFQNEKSKD--GVLKTCNAARYILNHSVPKEKFL--NTMKCGTCHEINSGATFMCLQCG 64

  Fly   271 YFGC-RGAHITSHLRSKKHNVALELSHGTLYCYACRDFIYDARSREYALINRKLEAKDLQKSIGW 334
            :.|| ..:|..||.:...|...:..::|.|:|:.|.|:|     ....|||..:.||        
Yeast    65 FCGCWNHSHFLSHSKQIGHIFGINSNNGLLFCFKCEDYI-----GNIDLINDAILAK-------- 116

  Fly   335 VPWVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRH- 398
             .|.....:|  ::.:..||       .||.||:|:|:||||:.|:|.|:|.|....:.||..| 
Yeast   117 -YWDDVCTKT--MVPSMERR-------DGLSGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHS 171

  Fly   399 -DCGSKSSHKCLVCEVSRLFQEFY------SGSRSPLSLHR------LLHLIWNHAKHLAGYEQQ 450
             :|..:|..||..|.:.::..|.|      ..|.|..|.:|      ||...|...::||||.||
Yeast   172 NNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQ 236

  Fly   451 DAHEFFIATLDVLHRHCV--KAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGML 513
            |||||:...::.:|:..|  ...|:..|::|:.                  ||.||:..:|.|.|
Yeast   237 DAHEFWQFIINQIHQSYVLDLPNAKEVSRANNK------------------QCECIVHTVFEGSL 283

  Fly   514 QSDVVCQAC-NGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTC 577
            :|.:||..| |...||.|||.|:|||:.:        .|.|.:||:.:.:.|.| ......|..|
Yeast   284 ESSIVCPGCQNNSKTTIDPFLDLSLDIKD--------KKKLYECLDSFHKKEQL-KDFNYHCGEC 339

  Fly   578 KSYQESTKQFSLRTLPSVVSFHLKRFEHSALI---DRKISSFIQFPVEFDMTPFMSEK-KNAYG- 637
            .|.|::.||..:..||||:...||||||  |:   :||:..||:||...:|..:.|.| |:.:. 
Yeast   340 NSTQDAIKQLGIHKLPSVLVLQLKRFEH--LLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSE 402

  Fly   638 -----DFRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 695
                 |..:.|..:|:|.||::.|||.|:.:.....|.|.:|.:::..|.::||..:.|||||
Yeast   403 NGKVPDIIYELIGIVSHKGTVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFY 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464 18/61 (30%)
Peptidase_C19D 365..696 CDD:239125 121/358 (34%)
UBP8NP_013950.1 zf-UBP 46..108 CDD:460464 18/66 (27%)
Peptidase_C19D 138..466 CDD:239125 121/357 (34%)

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