DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and UBP7

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_012110.1 Gene:UBP7 / 854650 SGDID:S000001418 Length:1071 Species:Saccharomyces cerevisiae


Alignment Length:484 Identity:102/484 - (21%)
Similarity:172/484 - (35%) Gaps:159/484 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 PN--QTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDC--------GSKSSHKCLVCE 205
            ||  .::.:.||.|||.||::|.::|.|.........|:|.::..        ||..|.| |...
Yeast   600 PNVYVSLSITGLRNLGNTCYINSMIQCLFAAKTFRTLFISSKYKSYLQPIRSNGSHYSPK-LSNS 663

  Fly   206 VSRLFQEFY-SGSRS--PLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEH 267
            :|.||.:.| :|..|  |....::::.:....|  ...:|||..||.:..||.||...  :..:|
Yeast   664 LSMLFNKMYLNGGCSVVPTGFLKVINQLRPDLK--IPDDQQDTQEFLMILLDRLHDEL--SDQQH 724

  Fly   268 ESKSNSS---GSGSGTNSSNSSSSHCYGQCNCI------IDQIFTGMLQSDVVCQACNGVSTTYD 323
            .:....:   .:......||:...|.:.: |.|      ||.||.|.:::.:.|:.|...:..|.
Yeast   725 VANDYPNLLLYNADALKVSNNEYKHWFDK-NVIGNGISPIDDIFQGQMENSLQCKRCGYTTFNYS 788

  Fly   324 PFWDISLDLGETTTH----GGVTPK--TLIDCLERYTRAEHLGSAAKIKCSTC------------ 370
            .|:.:||.:...:..    |..|.|  .|.||:..:|..|.|.......|..|            
Yeast   789 TFYVLSLAIPRRSMKLSKLGRSTEKRVKLEDCINMFTSDEVLSGENAWDCPRCGPTASVSTSVSA 853

  Fly   371 --------KSYQESTKQFSLR-------------------------------------------- 383
                    ||.::.::.|:|.                                            
Yeast   854 LENEPSIVKSKKKKSRFFTLHTGTKRRHLDFFGDGITEGHNSNNNNTTIFERERSRSPFRMLGGS 918

  Fly   384 -------------------------------------TLPSVVSFHLKRFEHSALIDRKISSFIQ 411
                                                 |||.::..||.||.:.  :.:|.::.:.
Yeast   919 GKRSSSSTPFSTGGNDSNNSSDYKNKKLTTVKTINFVTLPKILVIHLSRFYYD--LTKKNNTVVT 981

  Fly   412 FPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQ--------KDTWVKCDDH 468
            :|:..::.    .|.|  ...::.|:.||||.||:.:||||:.|...        :..|...||.
Yeast   982 YPLILNII----LKNN--DTMKYKLFGVVNHTGTLISGHYTSLVNKDLEHNVNIGRSKWYYFDDE 1040

  Fly   469 VITMASLK-------QVLDSEGYLLFYHK 490
            |: .|..|       ::..|:.|:|||.:
Yeast  1041 VV-KADRKHGSDKNLKISSSDVYVLFYER 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 99/472 (21%)
UBP7NP_012110.1 RHOD 328..443 CDD:197731
UCH 609..1066 CDD:395355 98/471 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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