DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and UBP12

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:756 Identity:120/756 - (15%)
Similarity:181/756 - (23%) Gaps:424/756 - (56%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSS-----HKCLVCEVSRLFQEFYS 422
            |..||:|||.||:||..:|.|||.|.|.|||:.|.::......     |..:....|.|.|:.:.
Yeast   362 GTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGYHGYVARAFSDLVQKLFQ 426

  Fly   423 GSRS--------PLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSN 479
            ...|        |.|:.:  ..|.:.....:||.|||:.||....||.||....:...:..::..
Yeast   427 NRMSIMQRNAAFPPSMFK--STIGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRIIKKEYTEKP 489

  Fly   480 SSGSGSGTNSSN--------SSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPF---- 532
            |...|...|..|        :...|....|:.|.| :|.||.:|.:.|..|..||.|:||:    
Yeast   490 SLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITD-LFVGMYKSTLYCPECQNVSITFDPYNDVT 553

  Fly   533 --------WD--------------ISLDLGETTTH----------GGVTPKTLI----------- 554
                    ||              :.::|.:::|:          .|:.|.||.           
Yeast   554 LPLPVDTVWDKTIKIFPMNSPPLLLEVELSKSSTYMDLKNYVGKMSGLDPNTLFGCEIFSNQIYV 618

  Fly   555 ----------------------------------------------------------------- 554
                                                                             
Yeast   619 NYESTESNAQFLTLQELIKPADDVIFYELPVTNDNEVIVPVLNTRIEKGYKNAMLFGVPFFITLK 683

  Fly   555 ----------------------------------------------------------------- 554
                                                                             
Yeast   684 EDELNNPGAIRMKLQNRFVHLSGGYIPFPEPVGNRTDFADAFPLLVEKYPDVEFEQYKDILQYTS 748

  Fly   555 ----------------------------------------------------------------- 554
                                                                             
Yeast   749 IKVTDKDKSFFSIKILSVEKEQQFASNNRTGPNFWTPISQLNLDKATDIDDKLEDVVKDIYNYSS 813

  Fly   555 ----------------------------------------------------------------- 554
                                                                             
Yeast   814 LVDCAEGVLMQVDDEGDTEGSEAKNFSKPFQSGDDEENKETVTNNENVNNTNDRDEDMELTDDVE 878

  Fly   555 ----------------------------------------------------------------- 554
                                                                             
Yeast   879 EDASTEPELTDKPEALDKIKDSLTSTPFAILSMNDIIVCEWSELGSNEAFSDDKIYNWENPATLP 943

  Fly   555 ----------------------DCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVS 597
                                  |||:.:::.|.||......|.|||.::::|||..|...|.::.
Yeast   944 NKELENAKLERSNAKERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILL 1008

  Fly   598 FHLKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAY 661
            .||||||.......||.:.:.||: :.|::.::..|.:..| ..:.||||.||.|.:..||||||
Yeast  1009 IHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRG-LIYDLYAVDNHYGGLGGGHYTAY 1072

  Fly   662 VRHQKDT-WVKCDDHVITMASLKQVLDSEGYLLFY---HKN 698
            |::..|. |...||..:|..:.:..:....|||||   ||:
Yeast  1073 VKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKD 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 117/750 (16%)
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 118/752 (16%)
Blue background indicates that the domain is not in the aligned region.

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