DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and DOA4

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_010354.3 Gene:DOA4 / 851641 SGDID:S000002476 Length:926 Species:Saccharomyces cerevisiae


Alignment Length:389 Identity:108/389 - (27%)
Similarity:168/389 - (43%) Gaps:86/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRH----DCGSKSSHKCLVCE-----VSRLFQEFY 421
            ||.|||.:|:||||:|.::.|..|:..|:.|.:    :..||...|.::.:     |..:::|..
Yeast   563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMMYKEQV 627

  Fly   422 SGSR----SPL-------SLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLH---RHC----- 467
            .||:    ||:       |::.|....          .|||..||....||.||   ..|     
Yeast   628 DGSKKISISPIKFKLACGSVNSLFKTA----------SQQDCQEFCQFLLDGLHEDLNQCGSNPP 682

  Fly   468 -----VKAKAEHESKSNSSGSG------SGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQA 521
                 .:|:|..|..|....|.      ..|:.|             :|..:|.|...|.:.|:.
Yeast   683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFS-------------VIVDLFQGQYASRLKCKV 734

  Fly   522 CNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQ 586
            |:..||||.||..:|:.:.:..:...:   |:.||...:|:.|:|....:..|..|:..|.||||
Yeast   735 CSHTSTTYQPFTVLSIPIPKKNSRNNI---TIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQ 796

  Fly   587 FSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEK----------------KNA 635
            .::..||..:..|||||::   :..|.:.|:.:|...|:|||.:..                :..
Yeast   797 LTITRLPRNLIVHLKRFDN---LLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQ 858

  Fly   636 YGDFRFSLYAVVNHVGTIDTGHYTAYVRH-QKDTWVKCDDHVITMASLK-QVLDSEGYLLFYHK 697
            ...|::.||.|..|.||:..|||||||:. .|..|:..||........| ..::|..|:||||:
Yeast   859 IPPFKYELYGVACHFGTLYGGHYTAYVKKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLFYHR 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 106/386 (27%)
DOA4NP_010354.3 RHOD 208..324 CDD:197731
UCH 562..920 CDD:425685 105/385 (27%)
Blue background indicates that the domain is not in the aligned region.

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