DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and UBP1

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_010161.1 Gene:UBP1 / 851435 SGDID:S000002280 Length:809 Species:Saccharomyces cerevisiae


Alignment Length:693 Identity:113/693 - (16%)
Similarity:190/693 - (27%) Gaps:360/693 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 WVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYF-------- 186
            |:|.:|.|:|     ...:::....|.  ||:|.|.|||||.::|:|..:..|.::.        
Yeast    80 WLPRSKFTHL-----DEEILKRGGFIA--GLVNDGNTCFMNSVLQSLASSRELMEFLDNNVIRTY 137

  Fly   187 ----MSDRHDCGS-------KSSHKCLVCEVSRLF-------------QEFYSGSRSP-----LS 222
                .::.::.|:       :::||....:..:::             :|....|:.|     ::
Yeast   138 EEIEQNEHNEEGNGQESAQDEATHKKNTRKGGKVYGKHKKKLNRKSSSKEDEEKSQEPDITFSVA 202

  Fly   223 LHRLLHLIWNHAKH------------------------LAGYEQQDAHEFFIATLDVLHRHCVKA 263
            |..||..:  :||:                        |.||:|:||.|||         ..:.|
Yeast   203 LRDLLSAL--NAKYYRDKPYFKTNSLLKAMSKSPRKNILLGYDQEDAQEFF---------QNILA 256

  Fly   264 KAEHESKSNSSGSGSGTNSSNSS--SSHCYGQCNC-----------IID----------QIFT-- 303
            :.|...||.::.....|..:.|.  .....||.|.           .||          |.||  
Yeast   257 ELESNVKSLNTEKLDTTPVAKSELPDDALVGQLNLGEVGTVYIPTEQIDPNSILHDKSIQNFTPF 321

  Fly   304 -------GMLQSDVVCQAC--NGVSTTYDPFWDISLDLGE------------------------- 334
                   |:....:.|..|  || ...|..|..:||:|..                         
Yeast   322 KLMTPLDGITAERIGCLQCGENG-GIRYSVFSGLSLNLPNENIGSTLKLSQLLSDWSKPEIIEGV 385

  Fly   335 -------TTTHG--------------GVTPKTLIDCL------------------ERYTRAEHLG 360
                   |..|.              |..|:.||:.:                  |.|.:. |..
Yeast   386 ECNRCALTAAHSHLFGQLKEFEKKPEGSIPEKLINAVKDRVHQIEEVLAKPVIDDEDYKKL-HTA 449

  Fly   361 SAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR--FEHSALIDRKISSFIQFPVEFDMTPF-- 421
            :..: |||       .:||..:...|.::|.|:.|  |:....:.||.:|.:.|....::.|:  
Yeast   450 NMVR-KCS-------KSKQILISRPPPLLSIHINRSVFDPRTYMIRKNNSKVLFKSRLNLAPWCC 506

  Fly   422 ------------MSEKKNA-----------------------------------YGD-------- 431
                        ||:|:.|                                   |.|        
Yeast   507 DINEINLDARLPMSKKEKAAQQDSSEDENIGGEYYTKLHERFEQEFEDSEEEKEYDDAEGNYASH 571

  Fly   432 ----------------------------------------------------------------- 431
                                                                             
Yeast   572 YNHTKDISNYDPLNGEVDGVTSDDEDEYIEETDALGNTIKKRIIEHSDVENENVKDNEELQEIDN 636

  Fly   432 ------------------------------------------FRFSLYAVVNHVGTIDTGHYTAY 454
                                                      ..:||.:|:.|.||.:.|||.|:
Yeast   637 VSLDEPKINVEDQLETSSDEEDVIPAPPINYARSFSTVPATPLTYSLRSVIVHYGTHNYGHYIAF 701

  Fly   455 VRHQKDTWVKCDDHVITMASLKQVLDSEG-YLLFYHKNVLEYE 496
             |..:..|.:..|..:.:....:||.:.| ::|||     ||:
Yeast   702 -RKYRGCWWRISDETVYVVDEAEVLSTPGVFMLFY-----EYD 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 104/656 (16%)
UBP1NP_010161.1 Peptidase_C19 101..>293 CDD:351799 41/204 (20%)
Peptidase_C19F 102..736 CDD:239127 105/660 (16%)
Peptidase_C19 <427..>510 CDD:351799 18/91 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1867
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.