DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and USP42

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001376579.1 Gene:USP42 / 84132 HGNCID:20068 Length:1327 Species:Homo sapiens


Alignment Length:415 Identity:112/415 - (26%)
Similarity:192/415 - (46%) Gaps:66/415 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DARSREYALINRKLEAKDLQKSIGWVPWV-------------PTTKETNLL---LANARRRLVRP 151
            ||.|..:..::...:..:...|:|.||..             |:.::...|   :|..::.|. |
Human    32 DAGSASWGAVSSLNDVSNHTLSLGPVPGAVVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLF-P 95

  Fly   152 NQTIGLR---------GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHK---CLVC 204
            ::.|.|:         ||.|||.|||.|..:|.|.:||.|::|.:|..|   ||:.|.   |::|
Human    96 SEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEH---SKTCHAEGFCMMC 157

  Fly   205 EVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHES 269
            .:.....:..|.....:....:::.:...|:|.....|:|||||...|:|.:.:.|:        
Human   158 TMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL-------- 214

  Fly   270 KSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGE 334
                       |.||....|.  |...::.|||.|.|:|.|.|..|.|||.|:||:.||:|::  
Human   215 -----------NGSNKLDRHT--QATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI-- 264

  Fly   335 TTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHS 399
                  ...:::...||::.:.|.|......|||.||....::|:|::....:|::..||||.: 
Human   265 ------KAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFAN- 322

  Fly   400 ALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQKDTWV 463
             ....||:..:::|...|:.|:||:....  ...:.||||:.|.| ....|||..|::.....|.
Human   323 -FTGGKIAKDVKYPEYLDIRPYMSQPNGE--PIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWY 384

  Fly   464 KCDDHVITMASLKQVLDSEGYLLFY 488
            :.:|.:::.:.::.||..:.|:|||
Human   385 QMNDSIVSTSDIRSVLSQQAYVLFY 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 112/415 (27%)
Peptidase_C19D 158..489 CDD:239125 98/344 (28%)
USP42NP_001376579.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 3/5 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..87 2/23 (9%)
Peptidase_C19E 110..410 CDD:239126 98/336 (29%)
PHA03247 <422..938 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..494
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..707
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 722..1026
PRK07764 <735..940 CDD:236090
PRK12678 846..>1113 CDD:237171
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1085..1131
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1149..1254
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1275..1294
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D929408at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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