DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and USP44

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_005269229.1 Gene:USP44 / 84101 HGNCID:20064 Length:743 Species:Homo sapiens


Alignment Length:699 Identity:150/699 - (21%)
Similarity:231/699 - (33%) Gaps:263/699 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NCFECGSYGIQLYACLHCIYFGCR---GAHITSHLRSKKHNVALELSHGTLYCYACRDFIY-DAR 105
            :|.:|.:.. .::|||.|.:..|.   ..|...|.:...|.||||::...::||.|.|::. |..
Human    28 HCVDCNTTE-SIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLNDNT 91

  Fly   106 SREYALINRKLEAKDLQ------------KSIG-------------------------------- 126
            :.:..|:.|.|.|...|            :|:|                                
Human    92 TGDLKLLRRTLSAIKSQNYHCTTRSGRFLRSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRI 156

  Fly   127 --------W-------------------------------------------------------- 127
                    |                                                        
Human   157 LMGKIFRTWFEQSPIGRKKQEEPFQEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQ 221

  Fly   128 ----------VP-WVPTTKETNLLLANARRRLV----------RPNQTIGLRGLLNLGATCFMNC 171
                      || ..|.:...:.:|:.:...:.          ||..|.|:.||.|||.||:||.
Human   222 STIIEIVSVQVPAQTPASPAKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNS 286

  Fly   172 IVQALVHT-----------------------------PLLSDYFMSDRHDCGSK----------- 196
            ::|.|.|.                             |.::|..:...::|..|           
Human   287 VLQVLSHLLIFRQCFLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSS 351

  Fly   197 ------------------------SSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHL 237
                                    |.:..|..|:..|||..:||..:.:|...:||.:|......
Human   352 LSSGLSGGASKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAF 416

  Fly   238 AGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIF 302
            .||.||||.||....||.:.|       |.|:...|..:...|     |......|...:::.||
Human   417 RGYAQQDAQEFLCELLDKIQR-------ELETTGTSLPALIPT-----SQRKLIKQVLNVVNNIF 469

  Fly   303 TGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGG----VTPKTLIDCLERYTRAEHLGSAA 363
            .|.|.|.|.|.||:..|.|.:||||:||:..|.....|    ..|..:.:.|.::|..|.|....
Human   470 HGQLLSQVTCLACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKI 534

  Fly   364 KIKCSTCKSYQ-----------ESTKQFSLRTLPSVVSFHLKRFEHSALI--------------- 402
            .: |..|.|.:           |:.||..:..||.|:..|||||..::|.               
Human   535 YV-CDQCNSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNG 598

  Fly   403 -----------------DRKISSFIQFPVEFDMTPFMSEK--KNAYGD-FRFSLYAVVNHVGT-I 446
                             ..||...:.|....:|.|:...:  |:...: |.:.|.|||.|.|. .
Human   599 KYDQQTEKITGWSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHGKGF 663

  Fly   447 DTGHYTAYVRHQK-DTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLE 494
            .:||||||..:.: ..||.|:|..::|.::.:|..::.|:|||.:.|.|
Human   664 GSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTE 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 18/60 (30%)
Peptidase_C19D 158..489 CDD:239125 112/446 (25%)
USP44XP_005269229.1 zf-UBP 29..90 CDD:280334 18/61 (30%)
UCH 272..706 CDD:278850 111/446 (25%)
Peptidase_C19 274..707 CDD:271592 112/445 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1867
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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