DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and UBP11

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_174562.2 Gene:UBP11 / 840179 AraportID:AT1G32850 Length:892 Species:Arabidopsis thaliana


Alignment Length:824 Identity:153/824 - (18%)
Similarity:238/824 - (28%) Gaps:344/824 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 DAGSDASAQANASADASSAVMSETGCRH-------YQSYVKEHS--------------YDTFRVI 231
            |:.||||       |....:|.|.|..:       ::..||.:.              |.....:
plant    86 DSESDAS-------DPQLRMMLEEGVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSV 143

  Fly   232 DAYFAACVNRDARERKAIHCNCFECGSYGIQLYACLHCIYFGCRG-------AHITSHLRSKK-- 287
            :.|.......|:|:.........:..|.| |||..:      |.|       |.|..:...||  
plant   144 EVYLLCLTLTDSRDESTTIIRLSKQASIG-QLYEMV------CAGKGVAKEKARIWDYFEKKKSV 201

  Fly   288 ------------------HNVALELSHGTLYCYACRDFIYDARSREYALI---NRKLEAKDLQKS 331
                              .::.||:...     |...|:......|.|::   ..:.:|.|:.:.
plant   202 LLDPSSEQSVEEAGLQFNQDILLEVDGS-----ASSQFVMSLAENELAMVPLEPMRSDAMDIVRG 261

  Fly   332 IGWVPWVPTTKE------------TNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALV 384
            .|      |...            .|....:...|.....:..||.||.|||.|||||..:|.|.
plant   262 GG------TLSNGHSNGFKFSFFGRNTFKDDVSSRTFGKGEKRGLGGLQNLGNTCFMNSTLQCLA 320

  Fly   385 HTPLLSDYFMSD-RHDCGSKS---SHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLA 445
            |||.:.:||:.| |.|..:|:   ....|......|.::.:|..::.::.......:...|...:
plant   321 HTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFS 385

  Fly   446 GYEQQDAHEFFIATLDVLHR--HCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQI 508
            ||.|.|:.|.....||.||.  :.||.|...|:| :|.|......:......|.....:.|:| :
plant   386 GYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEAK-DSDGRPDDEVAEEKWKYHKARNDSVIVD-V 448

  Fly   509 FTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTH---------------------------- 545
            |.|..:|.:||..|..:|.|:|||..:||.|..:.|.                            
plant   449 FQGQYKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSC 513

  Fly   546 ----------------------------------------------------------------- 545
                                                                             
plant   514 RDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHKGPGKVK 578

  Fly   546 ----------------------------------------------------------------- 545
                                                                             
plant   579 LEILHGEQEKSSDRGPKCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHMSCVVNSGNENGH 643

  Fly   546 -----------------------------------------------GGVT-------------- 549
                                                           |.||              
plant   644 VPDESSRSILSRDTETEDNDRELSLSLLRDYYSFNLQPLESDSVVNPGSVTKVLVKWNEKEHEKY 708

  Fly   550 --------PK---------------TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRT 591
                    ||               :|..|||.:...|.||......|..||.::::.|:..|..
plant   709 DSSYLNDLPKVHKNVLAKKTMQEGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWK 773

  Fly   592 LPSVVSFHLKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKNAYG-DFRFSLYAVVNHVGTID 654
            ||.::.||||||.:|.....||.:.:.|.: :.|::.::   ||..| .:.:.|||:.||.|.:.
plant   774 LPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYV---KNEDGQSYLYELYAISNHYGGLG 835

  Fly   655 TGHYTAYVRHQKDT-WVKCDDHVITMASLKQVLDSEGYLLFYHK 697
            .||||||.:...:| |...||..::..:..::..|..|:|||.:
plant   836 GGHYTAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFYQR 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464 15/83 (18%)
Peptidase_C19D 365..696 CDD:239125 112/581 (19%)
UBP11NP_174562.2 UBP12 20..879 CDD:227847 153/822 (19%)

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