DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and UBP8

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_568411.4 Gene:UBP8 / 832263 AraportID:AT5G22030 Length:913 Species:Arabidopsis thaliana


Alignment Length:874 Identity:159/874 - (18%)
Similarity:258/874 - (29%) Gaps:360/874 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 PLDATKHLRLSDCLRTVQKLAIELESADAGSDASAQANASADASSAVMSETGCRHYQSYVKEHSY 225
            |:....::..||.|..:::....|::.:.|     :|:.|....:.|.|:...:..:......|:
plant    64 PMKLINNIFNSDILFDLRREGDALQNGETG-----EASVSGRDFALVSSDMWLQALKCIRSNDSF 123

  Fly   226 DTFRVIDAYFAACVNRDARERKAIH--------CNCFECGS------YGIQL-YACLHCIYFGCR 275
            ..|.|..|...:..|...::|...|        ...|..|.      |.:|| .:.|........
plant   124 MEFFVFSASVHSLENEFLKKRLRYHDDKNTEKGVKSFSAGGVDRGDVYPVQLRLSVLQETNSLAW 188

  Fly   276 GAHITSHLRSKKHNVALELSHGTLYCY--ACRDFIYDAR-------------------------- 312
            .|.::.....|..|..|:   .::.|:  ||:.|..|:.                          
plant   189 SARLSFDKMIKNLNWILD---NSVECFRRACKIFSLDSEQLRIWDISGQTTLFFESDVSNSKDCQ 250

  Fly   313 ---SREYAL------INRKLEAKDLQKSIGWVPWVPTTKETNLLLANARR-----RLVRPNQ--- 360
               .:|..|      ::..::.|:.:|..|      :|::|| .:.|...     |..|.|.   
plant   251 QQADQEILLELQIYGLSDSIKLKESKKEDG------STQQTN-GITNGMNGGTVFRFGRSNSLSF 308

  Fly   361 --------TIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSD-------RHDCGSKSSHKCLV 410
                    |:||.||.|||.|||||..:|.|.|||.|.|:|:.:       .:..|.|..   :.
plant   309 LGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGE---IA 370

  Fly   411 CEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHR--HCVKAKAE 473
            .....|.:..::...|.::.......:...|...:|:.|.|:.|.....||.||.  :.||.|..
plant   371 LAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPY 435

  Fly   474 HESKSNSSGSGSGTNSSNSSS----SHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWD 534
            .|:|     .|.|...:..:.    :|.....:.|:| :..|..:|.:||..|..||..:|||..
plant   436 VEAK-----DGDGRPDAEVADEYWRNHVARNDSIIVD-VCQGQYKSTLVCPICKKVSVMFDPFMY 494

  Fly   535 ISLDLG----------------------------------------------------------- 540
            :||.|.                                                           
plant   495 LSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYN 559

  Fly   541 ----------------------------------------------------------------- 540
                                                                             
plant   560 NRIIRFLEEPTDSLTLIRDGDKLVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPL 624

  Fly   541 -----------------------------------ETTTHGGVTPKT------------------ 552
                                               |..|....|.||                  
plant   625 VSRLCDVENGSDVENLYLKLLSSFKMPTEFFTENLENPTEEEATDKTDTDGTTSVEDTNSTDVKE 689

  Fly   553 ----------------------------------------------------------------- 552
                                                                             
plant   690 TTESLPDPVLRLYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKELDVYDTCLLSSLPEVSK 754

  Fly   553 -----------LIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHS 606
                       |..|||.:...|.||......|..||.::::.|:..|..||.::..|||||.:|
plant   755 SGTKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYS 819

  Fly   607 ALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWV 670
            ..:..|:.:::.||:: .|::.::| .||....:|:.|||:.||.|::..|||||||.|..|.|.
plant   820 RFMKNKLEAYVDFPLDNLDLSSYIS-YKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHHGGDRWY 883

  Fly   671 KCDDHVITMASLKQVLDSEGYLLFYHKNV 699
            ..||..:...|.:::..|..|:|||.:.|
plant   884 DFDDSHVHQISQEKIKTSAAYVLFYKRLV 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464 14/65 (22%)
Peptidase_C19D 365..696 CDD:239125 110/597 (18%)
UBP8NP_568411.4 UBP12 168..910 CDD:227847 139/761 (18%)

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