DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and UBP16

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_567705.1 Gene:UBP16 / 828558 AraportID:AT4G24560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:336 Identity:98/336 - (29%)
Similarity:164/336 - (48%) Gaps:40/336 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSRSPLSL 223
            ||:|:|.:||.|.:.|.|:.||.|:.||:...|........:|..|...:|..: ....:||||.
plant   543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVK-AKEEKSPLSP 606

  Fly   224 HRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSS 288
            :.||..:.|....|...:::|||||....:|.:...|:||.....:||:..              
plant   607 NGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKL-------------- 657

  Fly   289 HCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERY 353
                :...:|...|.|.|:|.:.|..|...|...:...|:::::     .|.::  ||.|.|.|:
plant   658 ----EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEI-----DGDIS--TLDDALRRF 711

  Fly   354 TRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDM 418
            ||.|.|....|.:|.:||||:.:.|:..:...|:|::..||||:....  .|::..|:||...|:
plant   712 TRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF--GKLNKLIRFPETLDL 774

  Fly   419 TPFM---SEKKNAYGDFRFSLYAVVNHVGTID---TGHYTAYVRHQKDTWVKCDDHVITMASLKQ 477
            .|::   |||.:.|     .||.|:.|:..::   :|||..|:|:| :.|.|.||..:..:.:::
plant   775 APYVSGGSEKSHDY-----KLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVER 833

  Fly   478 VLDSEGYLLFY 488
            :|....|:|||
plant   834 ILTKGAYMLFY 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 98/336 (29%)
UBP16NP_567705.1 zf-MYND 74..111 CDD:396356
Peptidase_C19 541..845 CDD:351799 98/336 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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