DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and UBP10

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001328408.1 Gene:UBP10 / 826651 AraportID:AT4G10590 Length:910 Species:Arabidopsis thaliana


Alignment Length:775 Identity:147/775 - (18%)
Similarity:228/775 - (29%) Gaps:333/775 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ERKAIHCNCFECGSYGIQLY-ACLH---------------------------CIYFGC--RGAHI 72
            |||.| |..|...||.:::| .||.                           |...|.  ..|||
plant   130 ERKLI-CQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQASIRELYEKVCALTGVPQEKAHI 193

  Fly    73 TSHLRSKKHNVALELSHGTL---YCYACRDFIYD------------ARSREYALINRKLEAKDLQ 122
            ..:...:|:.:...||:.:|   ..:..:|.:.:            :...|.||:  .||.....
plant   194 WDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEVDGSSSSQSAMSSTGNELALV--PLEPSRSS 256

  Fly   123 KSIGWVPWV----PTTKETNLLL-------ANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQAL 176
            .:|...|.:    .||...:|..       .:....::...:..||.||.|||.|||||..:|.|
plant   257 VTIAGGPTLSNGHSTTSNFSLFPRITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCL 321

  Fly   177 VHTPLLSDYFMSDRHD----------CGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIW 231
            .|||.:.:||:.|..|          ||.      |......|.::.:|..|:.::.......:.
plant   322 AHTPPIVEYFLQDYSDDINRDNPLGMCGE------LAIAFGDLLKKLWSSGRNSVAPRAFKTKLA 380

  Fly   232 NHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNC 296
            ..|...:||.|.|:.|.....||.||....|.|.:...:...|.|......:....::...:.:.
plant   381 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDS 445

  Fly   297 IIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTT------------------------ 337
            :|..:..|..:|.:||.||..:|.|:|||..:|:.|..|.|                        
plant   446 VIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVP 510

  Fly   338 ----------------------------------------------------------------- 337
                                                                             
plant   511 KNGSIRDLITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKG 575

  Fly   338 ---------HGG---------------------VT------------------------------ 342
                     |||                     ||                              
plant   576 SGKAKLEILHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPS 640

  Fly   343 -------------------------PKTLID---------------------------------- 348
                                     |.|.||                                  
plant   641 KIHNGSENGHLPDATVDEASEILSSPDTEIDDASDRELSFRIFLTDERGLNFKPLQSESSISLGI 705

  Fly   349 ----------------------------------------------CLERYTRAEHLGSAAKIKC 367
                                                          |||.:...|.||......|
plant   706 ATRVLVEWNEGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFC 770

  Fly   368 STCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKNAYGD 431
            .:||.::::.|:..|..||.::.||||||.:|..:..||.:|:.||| :.|::.::..|.:.  .
plant   771 PSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQ--S 833

  Fly   432 FRFSLYAVVNHVGTIDTGHYTAYVRHQKDT-WVKCDDHVITMASLKQVLDSEGYLLFYHK 490
            :.:.||||.||.|.:..||||||.:...|. |...||..::..:..::.:|..|:|||.:
plant   834 YLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRR 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 16/89 (18%)
Peptidase_C19D 158..489 CDD:239125 113/596 (19%)
UBP10NP_001328408.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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