DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and UBP9

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_192795.3 Gene:UBP9 / 826649 AraportID:AT4G10570 Length:923 Species:Arabidopsis thaliana


Alignment Length:779 Identity:145/779 - (18%)
Similarity:226/779 - (29%) Gaps:340/779 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ERKAIHCNCFECGSYGIQLY-ACLH---------------------------CIYFGC--RGAHI 72
            |||.| |..|...||.:::| .||.                           |...|.  ..|||
plant   130 ERKLI-CQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQASIRELYEKVCAMTGVPQEKAHI 193

  Fly    73 TSHLRSKKHNVALELSHGTL---YCYACRDFIYD-------------ARSREYALINRKLEAKDL 121
            ..:...:|:.:...||:.:|   ..:..:|.:.:             :...|.||:  .||.   
plant   194 WDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLSSSSQSAMSSTGNELALV--PLEP--- 253

  Fly   122 QKSIGWVPWVPTTKETNLLLAN------------ARRRL--VRPNQTIGLRGLLNLGATCFMNCI 172
            .:||..:...||....:...:|            .|..|  :...:..||.||.|||.|||||..
plant   254 SRSIVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSA 318

  Fly   173 VQALVHTPLLSDYFMSDRHD----------CGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLL 227
            :|.|.|||.:.:||:.|..|          ||.      |......|.::.:|..|:.::.....
plant   319 LQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGE------LAIAFGDLLKKLWSSGRNAVAPRAFK 377

  Fly   228 HLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYG 292
            ..:...|...:||.|.|:.|.....||.||....|.|.:...:...|.|......:....::...
plant   378 TKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKA 442

  Fly   293 QCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTT-------------------- 337
            :.:.:|..:..|..:|.:||..|..:|.|:|||..:|:.|..|.|                    
plant   443 RNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYT 507

  Fly   338 ----------------------------------------------------------------- 337
                                                                             
plant   508 VIVPKQGSIRDLITALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQ 572

  Fly   338 -------------HGG------------------------------------------------- 340
                         |||                                                 
plant   573 IPKGSRKAKLEILHGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDAVISGFLSPLHKV 637

  Fly   341 ----------------------------------------------------------------V 341
                                                                            :
plant   638 HAPSKIHNGSDNGHLADATVDQASGILSSPDTEIDNASDRELSFRIFLTDERGLNIKPLQSESSI 702

  Fly   342 TPKT-------------------------------------------LIDCLERYTRAEHLGSAA 363
            :|.|                                           |..|||.:...|.||...
plant   703 SPGTVTRVLVEWNEGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDD 767

  Fly   364 KIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKN 427
            ...|.:||.::::.|:..|..||.::.||||||.:|..:..||.:|:.||| :.|::.::..|..
plant   768 MWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNG 832

  Fly   428 AYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQKDT-WVKCDDHVITMASLKQVLDSEGYLLFYHK 490
            .  .:.:.||||.||.|.:..||||||.:...|. |...||..::..:..::.:|..|:|||.:
plant   833 Q--SYLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRR 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 16/89 (18%)
Peptidase_C19D 158..489 CDD:239125 109/596 (18%)
UBP9NP_192795.3 UBP12 17..894 CDD:227847 145/777 (19%)
DUSP 38..137 CDD:197831 5/7 (71%)
Peptidase_C19 304..>480 CDD:271592 50/181 (28%)
USP7_C2 505..>566 CDD:291217 0/60 (0%)
Peptidase_C19R <740..893 CDD:239139 50/154 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.