DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and UBP5

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001323724.1 Gene:UBP5 / 818691 AraportID:AT2G40930 Length:924 Species:Arabidopsis thaliana


Alignment Length:765 Identity:133/765 - (17%)
Similarity:216/765 - (28%) Gaps:344/765 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RERKAIHCNCFECGSYGIQLYACLHCIYFGCRGAHITSHLRSKKHNVALELSHGTLYCYACRDFI 101
            ||.....|..|:..|..::::.     |:|.:...:.:.|.....:..|::....|.        
plant   184 RELHRRACEIFDLDSEHVRIWD-----YYGHQKYSLMNDLDKTLDDANLQMDQDILV-------- 235

  Fly   102 YDARSREYALINRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPNQ------------- 153
                  |...||..|.:..:|          :.:|..|:..::...|:.|::             
plant   236 ------EVLDINGTLSSAHIQ----------SAQENGLVDGDSTSILIEPSKSSLAAAGGFSSSR 284

  Fly   154 ----------------------------TIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDR 190
                                        |.||.||||||.|||||..:|.|||||..:.||..|.
plant   285 NAFRTGSVEVSQSFDNTYSSTGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDY 349

  Fly   191 HDCGSKSSHKCLVCEVSRLF----QEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIA 251
            |...:..:...:|.|::..|    ::.::..|:|::.......:...|...:||.|.|:.|....
plant   350 HQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAF 414

  Fly   252 TLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSS---SSHCYGQCNCIIDQIFTGMLQSDVVCQ 313
            .||.||....:.|  |:...||..:....:...:.   .:|.....:.|:| :..|..:|.:||.
plant   415 LLDGLHEDLNRVK--HKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVD-VCQGQYKSTLVCP 476

  Fly   314 ACNGVSTTYDPFWDISLDL---------------------------------------------- 332
            .||.||.|:|||..:||.|                                              
plant   477 ICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDLIQALTNACS 541

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
plant   542 LKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSKSSENTTLLRLVLRRRDQKAGE 606

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
plant   607 RESTVQLKPCGTPLLSSASCGDALTKGKIHCLVQNMLSPFRREESVGKKGNSDSSIPERRSARFN 671

  Fly   333 ----------------------------------------------------------------- 332
                                                                             
plant   672 NTEEEDKVGGLKKAKKSNSSDLGASKLSLQLIDEDNKTINLPDNEAEAMKLPSSATVTIYLDWTP 736

  Fly   333 --------------------GETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQEST 377
                                |.||......|.:|..|||.:.|.|.|.......|..|...::::
plant   737 ELSGMYDITCLESLPEVLKYGPTTKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQAS 801

  Fly   378 KQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKNAYGDFRFSLYAVVN 441
            |:..|..||.|:..|||||.:|..:..|:.:|:.||: :.|:|.::: .||......:.|||:.|
plant   802 KKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVA-NKNLSQPQLYELYALTN 865

  Fly   442 HVGTIDTGHYTAYVRHQKDT-WVKCDDHVITMASLKQVLDSEGYLLFYHK 490
            |.|.:.:|||||:::...|: |...||..|:..:...|.....|:|||.:
plant   866 HYGGMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 7/56 (13%)
Peptidase_C19D 158..489 CDD:239125 110/600 (18%)
UBP5NP_001323724.1 UBP12 32..917 CDD:227847 133/765 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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