DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and Usp16

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_077220.2 Gene:Usp16 / 74112 MGIID:1921362 Length:825 Species:Mus musculus


Alignment Length:827 Identity:159/827 - (19%)
Similarity:248/827 - (29%) Gaps:361/827 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SETGCRHYQSYVKEHSYDTFRVIDAYFAACVN-------RDARERKAIHCNCFECGSYGIQLYAC 59
            :|..|||.:..:::.:... .:::..:..|.:       :|..|.:|      |..|    ::.|
Mouse    20 AEPVCRHLRKGLEQGNLKK-ALVNVEWNICQDCKTDNKVKDKPEEEA------EDPS----VWLC 73

  Fly    60 LHCIYFGC----RGAHITSHL---RSKKHNVALELSHGTLYCYACRDFIYDARSREYALINRKLE 117
            |.|.:.||    :..|...|.   ||:.|.:.|.|.:.:::||.|.:.:      :|...||..:
Mouse    74 LKCGHQGCGRDSQEQHALKHYTTPRSEPHYLVLSLDNWSVWCYKCDEEV------KYCSSNRLGQ 132

  Fly   118 AKD-LQKSIGWVPWVPTTKET-NLLLANARRRLVRPNQ--------------------TIGLRGL 160
            ..| ::|..|.....|..|.. ::.|.|.:......|:                    .|.::||
Mouse   133 VVDYVRKQAGVRTSKPAEKNNGHIELENKKLEKESKNEQEREKSENLAKETIPMDSASQITVKGL 197

  Fly   161 LNLGATCFMNCIVQALVHTP----LLSDYFMS------DRHDCGSKSSHKC-------LVCEVSR 208
            .|||.|||.|.::|.|..||    ||.:..||      :..|.......:.       |...:|:
Mouse   198 SNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEVNLEPPGPLTLAMSQ 262

  Fly   209 LFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHE--SKS 271
            ...|.....:..::...|...:...|....||:|||:.|.....||.:...      ||:  ||.
Mouse   263 FLSEMQENKKRVVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRAE------EHQRVSKG 321

  Fly   272 NSSGSGSGTNSSNSSSSH---CYGQCNCI---IDQIFTGMLQSDVVCQACNGVSTTYDPFWDISL 330
            .....|:.|...:....:   .|.:...|   :|:||.|.|.|.::|..|..||..::.|.|:||
Mouse   322 ILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSL 386

  Fly   331 -----------------------------------------DL---------------------- 332
                                                     ||                      
Mouse   387 PVLDDQSGKKSINDKNVKMTMEEEDKDSEEEKDDSYMKSRSDLPSGTSKHLQKKAKKQAKKQAKN 451

  Fly   333 -----------------------------------GET-----TTHGG----------------- 340
                                               ||.     :|||.                 
Mouse   452 QRRQQKIQERFLHFNELCATDYTEDNEREADTALAGEVEVDTDSTHGSQEEATQIELSVNQKDLD 516

  Fly   341 --------------------------------VTP---------------------------KTL 346
                                            |||                           |.|
Mouse   517 GQESMIERTPDVQESPEDLGVKSANTESDLGIVTPAPECPRDFNGAFLEERTSGELDIINGLKNL 581

  Fly   347 -----ID------------------------------------------------CLERYTRAEH 358
                 :|                                                ||.::||.|.
Mouse   582 NLNAAVDPDEINIEIPNDSHSAPKVYEVMNEDPETAFCTLANREAFSTDECSIQHCLYQFTRNEK 646

  Fly   359 LGSAAKIKCSTCKS-----------------YQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKI 406
            |..|.|:.|..|..                 |..:.||..:...|.|::.|||||:.:....||:
Mouse   647 LQDANKLLCEVCSRRQCNGPKANIKGDRRHVYTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKV 711

  Fly   407 SSFIQFPVEFDMTPFMSEK-KNAYGD---FRFSLYAVVNHVGTIDTGHYTAYVRHQ--------- 458
            :..|:||...|:.||.:.| ||...:   ..:|||.||.|.||:.:||||||.:.:         
Mouse   712 NKHIKFPEILDLAPFCTLKCKNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNL 776

  Fly   459 ---------------KDTWVKCDDHVITMASLKQVLDSEGYLLFYHK 490
                           |..|....|..:....:.:||:|:.|||||.:
Mouse   777 VLHGDIPQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYER 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 17/63 (27%)
Peptidase_C19D 158..489 CDD:239125 121/632 (19%)
Usp16NP_077220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 159/827 (19%)
zf-UBP 48..122 CDD:366940 21/83 (25%)
UBP12 <135..823 CDD:227847 131/693 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..184 1/19 (5%)
Peptidase_C19K 196..>401 CDD:239132 53/210 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..456 2/62 (3%)
Peptidase_C19K <624..822 CDD:239132 55/197 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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