DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and USP1

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001017415.1 Gene:USP1 / 7398 HGNCID:12607 Length:785 Species:Homo sapiens


Alignment Length:527 Identity:97/527 - (18%)
Similarity:151/527 - (28%) Gaps:238/527 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 GLLNLGATCFMNCIVQALVHTP-------------------LLSDYFMSDRHDC--GSKSSHKCL 202
            ||.|||.||::|.|:|.|...|                   |..:....|:.:|  .|.:|:: |
Human    82 GLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEANQKDKGNCKEDSLASYE-L 145

  Fly   203 VCEVSRLF-------------QEFYSG--SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIAT 252
            :|.:..|.             .|.|:.  :..|   .|||:.:........||.|.||.|.....
Human   146 ICSLQSLIISVEQLQASFLLNPEKYTDELATQP---RRLLNTLRELNPMYEGYLQHDAQEVLQCI 207

  Fly   253 LDVLHRHC--------------------------------------------------------- 260
            |..:...|                                                         
Human   208 LGNIQETCQLLKKEEVKNVAELPTKVEEIPHPKEEMNGINSIEMDSMRHSEDFKEKLPKGNGKRK 272

  Fly   261 -----------VKAKAEHES------------------------------KSNSSGSGSGTNS-- 282
                       ||...||:|                              ..|.|...|...|  
Human   273 SDTEFGNMKKKVKLSKEHQSLEENQRQTRSKRKATSDTLESPPKIIPKYISENESPRPSQKKSRV 337

  Fly   283 -------------------------------SNSSSSHC-----YGQC-------NC-------- 296
                                           ..|..:.|     .|:|       .|        
Human   338 KINWLKSATKQPSILSKFCSLGKITTNQGVKGQSKENECDPEEDLGKCESDNTTNGCGLESPGNT 402

  Fly   297 ----------------------IIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISL-----DLGE 334
                                  :::::|.|.|.....|..|..::...:.|.|||:     :|.:
Human   403 VTPVNVNEVKPINKGEEQIGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSK 467

  Fly   335 TTTHGGVTP------KTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHL 393
            ......::|      |||...:.::...|.:....|..|..|..|.|:.:......:|.|::.||
Human   468 VEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHL 532

  Fly   394 KRFEHSAL-ID------RKISSFIQFPVEFDMTPFMSEKKN-AYGDFRFSLYAVVNHVG-TIDTG 449
            |.|..|.| .|      .||::.:..|::..:..:.::..| :||     |:|||.|.| ||.:|
Human   533 KCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYG-----LFAVVMHSGITISSG 592

  Fly   450 HYTAYVR 456
            ||||.|:
Human   593 HYTASVK 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 97/527 (18%)
USP1NP_001017415.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..52
Peptidase_C19 82..>222 CDD:321984 34/143 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..336 8/77 (10%)
Peptidase_C19O <424..599 CDD:239136 48/179 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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