DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment not and usp33

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001016228.1 Gene:usp33 / 548982 XenbaseID:XB-GENE-1016674 Length:892 Species:Xenopus tropicalis


Alignment Length:672 Identity:149/672 - (22%)
Similarity:230/672 - (34%) Gaps:252/672 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KAIHCNCFECGSYGIQLYACLH--CIYFGCRGAHI---TSHLRSKKHNVALELSHGTLYCYACRD 99
            |..|.:|.:|...|..|:|||.  |.|.||..:|:   |.|.:..||.:.:.|:...::||.|..
 Frog    24 KKSHGSCQDCRVRGPNLWACLENGCSYVGCGESHVDHSTLHSQDTKHCLTVNLTTLRVWCYTCSK 88

  Fly   100 FIYDARSREYALINRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPN-----------Q 153
            .::..|.......:.||:....|:|          |.::.|.......:|..|           :
 Frog    89 EVFLDRKLSTQPTSAKLQDSHTQES----------KMSSSLTLKIPAAVVSENLDIELEEEDELK 143

  Fly   154 TIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCG--SKSSHKCLVCEVSRLFQEFYSG 216
            |.||.||.|:|.||:||..:|||.:.|.|:.||:    |||  :::..|..:|:           
 Frog   144 TRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFL----DCGGLARTDKKPALCK----------- 193

  Fly   217 SRSPLSLHRLLHLIWNHAK------------------HLAGYEQQDAHEFFIATLDVLHRHCVKA 263
                 |..:|:..||:..:                  ...||.||||.||....:||||....:.
 Frog   194 -----SYQKLMSDIWHKNRPGFVIPTNLFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEELKEQ 253

  Fly   264 --------------------KAEHESKSNSSGSGSGTNSSNSSS--------------------- 287
                                |::.::..:|..|||.::.:.|.|                     
 Frog   254 IVEVEEDAQTGIVEENLDEDKSQSDNDFHSCDSGSSSDHAESESRKLSEELTESTMLIHEDQKDV 318

  Fly   288 -----------------------------------SHCY-------------------------- 291
                                               |.|.                          
 Frog   319 EICKTWQKEKKFSNNLNQNHFLQDFEKNIQSTIEESECLKQETVKVQIQSKAADFTAEVNMNDLP 383

  Fly   292 ---------------------------------GQC----------NCIIDQIFTGMLQSDVVCQ 313
                                             |.|          :.:|..||.|.:.|.|.|.
 Frog   384 TSQTPLLNEGATTHLSSSPPKPGAVWTGHKKVPGLCPAKKRKQKKYHSVIADIFDGTIVSSVQCL 448

  Fly   314 ACNGVSTTYDPFWDISL------DLGE--TTTHGGVTPK-------------------------- 344
            .|:.||.|.:.|.|:||      ||.:  :::|.....|                          
 Frog   449 TCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHQSSLVKAGSCGEAYAPQGWIAFFLEYFKSWFW 513

  Fly   345 ----TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRK 405
                ||.|||..:...:.|.......|..||..:...|...::..|.::..|||||.|..:...|
 Frog   514 GPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTK 578

  Fly   406 ISSFIQFPVE-FDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRHQ-KDTWVKCDDH 468
            |.:.:.||:| .|:.||:: |.:......:.|.:|:.|.||..:|||.||.|:. .:.|.:.||.
 Frog   579 IGTHVSFPLEGLDLQPFLA-KDSPSQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQ 642

  Fly   469 VITMASLKQVLDSEGYLLFYHK 490
            .:|..|...|.::|.|:|||.|
 Frog   643 SVTEVSEATVQNAEAYVLFYRK 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 20/61 (33%)
Peptidase_C19D 158..489 CDD:239125 113/535 (21%)
usp33NP_001016228.1 zf-UBP 30..90 CDD:280334 20/59 (34%)
UCH 147..662 CDD:278850 113/535 (21%)
Peptidase_C19 148..>178 CDD:271592 15/33 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..311 7/42 (17%)
Peptidase_C19R 430..663 CDD:239139 66/233 (28%)
DUSP 684..764 CDD:197831
DUSP 790..871 CDD:197831
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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