DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and Usp27x

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_062334.2 Gene:Usp27x / 54651 MGIID:1859645 Length:438 Species:Mus musculus


Alignment Length:445 Identity:236/445 - (53%)
Similarity:285/445 - (64%) Gaps:65/445 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 CRDFIYDARSREYALINRKLEAKDLQKSIGW--------VP--------WVPTTKETNLLLANAR 145
            |:|::||....:.|. ..:.||..||.|...        ||        |..|..|..||..|.|
Mouse     2 CKDYVYDIDIEQIAK-EEQGEALKLQASTSTEVSQQQCSVPGLGEKYPTWETTKPELELLGHNPR 65

  Fly   146 RRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLF 210
            ||.:..:.|||||||:|||.|||||||||||.|||:|.|:|:||||.|...|...|||||:|.||
Mouse    66 RRRIASSFTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLF 130

  Fly   211 QEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSG 275
            :|.|||:.||...::||||:|.||:|||||.|||||||.||.||||||||             .|
Mouse   131 RELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC-------------KG 182

  Fly   276 SGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL-GETTTHG 339
            ...|..:||.:      .|||||||||||.|||||.||||:|||||.||.||||||| |..|:..
Mouse   183 DDVGKVASNPN------HCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFW 241

  Fly   340 GVTP---------------KTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVV 389
            .::|               .||.|||.|:||.|||||:|||||.:|:||||||||.:::.||.|.
Mouse   242 PMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVA 306

  Fly   390 SFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKK-------------NAYGDFRFSLYAVVN 441
            .||.|||||||...|||:::|.||:|.||||||:..|             :|..:.::||:||||
Mouse   307 CFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVN 371

  Fly   442 HVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEYE 496
            |.||:::||||:::||.:|.|.||||.|||.||:|.|||||||||||||.|||.|
Mouse   372 HQGTLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEPE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 2/5 (40%)
Peptidase_C19D 158..489 CDD:239125 204/359 (57%)
Usp27xNP_062334.2 UCH 77..418 CDD:278850 204/359 (57%)
Peptidase_C19D 78..419 CDD:239125 204/359 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 416 1.000 Domainoid score I657
eggNOG 1 0.900 - - E1_KOG1867
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 534 1.000 Inparanoid score I1186
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59954
OrthoDB 1 1.010 - - D200191at33208
OrthoFinder 1 1.000 - - FOG0002382
OrthoInspector 1 1.000 - - otm43148
orthoMCL 1 0.900 - - OOG6_102914
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1591
SonicParanoid 1 1.000 - - X1575
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.910

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