DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and AT4G22285

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001078426.1 Gene:AT4G22285 / 5008155 AraportID:AT4G22285 Length:541 Species:Arabidopsis thaliana


Alignment Length:493 Identity:111/493 - (22%)
Similarity:179/493 - (36%) Gaps:147/493 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IQLYACLHC-IYFGCRG--AHITSHLRSKKHNVALELSHGTLYC----YACRD-FIYDARSREYA 110
            :.:||||.| .||..|.  :|..:|.....|:|.:.|....:||    |...| .:.|.|.    
plant   137 LNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLPDSYEINDPSLDDIRH---- 197

  Fly   111 LIN---RKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCI 172
            ::|   .:.:..:|.|:..|                 .|.|...:...|:.||.|:..|.|:|..
plant   198 VLNPRFSRAQVNELDKNRQW-----------------SRALDGSDYLPGMVGLNNIQKTEFVNVT 245

  Fly   173 VQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHR---LLHLIWNHA 234
            :|:|:....|.::|                      |..|.|...:||| :||   |...|| ||
plant   246 IQSLMRVTPLRNFF----------------------LIPENYQHCKSPL-VHRFGELTRKIW-HA 286

  Fly   235 KHLAGY---------------------EQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGS 278
            ::..|.                     :|.|..||....|:.||                    .
plant   287 RNFKGQVSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLH--------------------M 331

  Fly   279 GTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTP 343
            ...:|..:||        ||.:.|.|.|:.....|.......:...|..:.|||........|..
plant   332 DLRTSKDASS--------IIHKCFQGELEVVKEFQGNENKEISRMSFLMLGLDLPPPPLFKDVME 388

  Fly   344 KTLI------DCLERY---TRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEH 398
            |.:|      |.|:::   |..|.: ...|:::....||             |..:.||:.||:.
plant   389 KNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVIKS-------------PRYLMFHMVRFKK 440

  Fly   399 SALIDRKISSFIQFPVEFDM--------TPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYV 455
            :.....|..:.:.|||: ||        .|...|.:|...  :::|.|.:.|.|..:.|::..:|
plant   441 NNFFKEKNPTLVNFPVK-DMELRDYIPSLPRAPEGENVCS--KYNLIANIVHDGKPEDGYFRVFV 502

  Fly   456 -RHQKDTWVKCDD-HVITMASLKQVLD-SEGYLLFYHK 490
             |..::.|.:..| ||  ..:|.|::: ||.|:..|.:
plant   503 QRKSQELWYEMQDLHV--AETLPQMVELSEAYMQIYEQ 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999 17/56 (30%)
Peptidase_C19D 158..489 CDD:239125 84/375 (22%)
AT4G22285NP_001078426.1 Peptidase_C19M 112..537 CDD:239134 110/490 (22%)
UCH 231..536 CDD:278850 84/374 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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