Protein Alignment not and usp3

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_012821863.1
• Gene: usp3 / 448475
• XenbaseID: XB-GENE-962759
• Length: 522
• Species: Xenopus tropicalis
• Alignment Length: 487
• Identity: 149/487 - (30%)
• Similarity: 233/487 - (47%)
• Gaps: 62/487 - (12%)

  Fly    44 CNCFECGSYGIQLYACLHCIYFGCRGAHITSHLRSKK-------HNVALELSHGTLYCYACRDFI 101
            |:...||.| :..:|..|   :....|.:..|.|.:|       |.|.::.|..:.|||.|.||:
 Frog    44 CSSVHCGRY-VNGHAKKH---YEDAQAPLNCHKRQEKTDKDRMQHTVCMDCSSYSTYCYRCDDFV 104

  Fly   102 YDARSREYALINRKLE-AKDLQKSIGWVPWVPTTKETN-----LLLANARRRLVRPN-QTIGL-- 157
              ....:..|:.:..| .::|:.|       ..|.|.:     |..|:..::|::.| .|..|
 Frog   105 --VNDTKLCLVQKVREHLQNLENS-------AFTAERHRKRKFLESASLSKKLLKVNGSTTALCA 160

  Fly   158 RGLLNLGATCFMNCIVQALVHTPLLSDYF-------MSDRHDCGSKSSHK--------CLVCEVS 207
            .||.|||.|||||.|:|:|.:......||       :.:....|.::.|.        .||.|..
 Frog   161 TGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLVEEFR 225

  Fly   208 RLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSN 272
            :.....:.|:::..|...|.:::|....:..||:|||||||....||.||   ::.:.|.:..|:
 Frog   226 KTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH---LELQGEFDGSSH 287

  Fly   273 SSGSGSGTNSSNSSSSH-CYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGE-- 334
            |..|.:  |.|.|:|:. |....:.::..:|.|:||::|.|..|...|..:|||.|:|||:..
 Frog   288 SVLSQA--NCSRSASNKCCINGASTVVTSVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQF 350

  Fly   335 -----TTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLK 394
                 .....|.| .||.|||..:|..|.|.......|..||..|:|||:|.::.||.|:..|||
 Frog   351 RNKRCKNQENGPT-CTLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLK 414

  Fly   395 RFEHSALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGD-FRFSLYAVVNHVGT-IDTGHYTAYVR 456
            ||..:|.:..|:.:::.||:. .||..|:.|.:|...: ..:.|.|||.|.|: :.:||||||..
 Frog   415 RFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYAT 479

  Fly   457 HQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 488
            | |..|...:|..:|:...:.|..::.|:|||
 Frog   480 H-KGRWFHFNDSTVTLTEEETVAKAKAYILFY 510

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	18/63 (29%)
		Peptidase_C19D	158..489	CDD:239125	118/357 (33%)
usp3	XP_012821863.1	zf-UBP	29..107	CDD:366940	19/68 (28%)
		UCH	161..510	CDD:366104	116/355 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D929408at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010