DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and faf

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster


Alignment Length:457 Identity:102/457 - (22%)
Similarity:156/457 - (34%) Gaps:158/457 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 RPNQTIGLRGLLNLGATCFMNCIVQ---------------------------------------- 174
            ||  |.|..||.|.||||:||.::|                                        
  Fly  1662 RP--TKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSA 1724

  Fly   175 -------ALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWN 232
                   |||..|..|.......||. .|:.|..::..|..:|...   ..|.|..: :...:|.
  Fly  1725 LFSGPASALVSLPSSSSTIEDGLHDV-RKNYHVVILKHVQAIFAHL---GHSALQYY-VPRGLWT 1784

  Fly   233 HAKHLAG----YEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQ 293
            |.|.|..    .|||||.|||::.|:.|... :||..:.:..:.:.|                  
  Fly  1785 HFKLLGEPVNLREQQDAVEFFMSLLESLDEG-LKALGQPQLMNATLG------------------ 1830

  Fly   294 CNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEH 358
                      |......:||.|....:..:||...|:|:   ..|..:|     :.||:|.:.|.
  Fly  1831 ----------GSFSDQKICQECPHRYSKEEPFSVFSVDI---RNHSSLT-----ESLEQYVKGEL 1877

  Fly   359 LGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDR----KISSFIQFPVEFDMT 419
            |..|....|..|.....:.|:..::.||.|::..|||||:.  .:|    |.:.:.:||...||.
  Fly  1878 LEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYD--YERVCAIKFNDYFEFPRILDME 1940

  Fly   420 PF-------MSEKKNAYGD--------FRFSLYAVVNHVGTIDTGHYTAYV-----RHQKDTWVK 464
            |:       :..:....||        .::.|..:|.|.|....|||.:|:     .:.|..|.|
  Fly  1941 PYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSGQASGGHYFSYILSKNPANGKCQWYK 2005

  Fly   465 CDDHVITMASLKQVLDSE--------------------------------GYLLFY---HKNVLE 494
            .||..:|...:.:  |.|                                .|:|||   .:..::
  Fly  2006 FDDGEVTECKMHE--DEEMKAECFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLFYTRCDQTPVQ 2068

  Fly   495 YE 496
            ||
  Fly  2069 YE 2070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 96/440 (22%)
fafNP_524612.2 peptidase_C19C 1666..2064 CDD:239124 97/443 (22%)
UCH 1668..2059 CDD:278850 94/436 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456864
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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