DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and Usp32

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001262074.2 Gene:Usp32 / 40169 FlyBaseID:FBgn0036913 Length:1779 Species:Drosophila melanogaster


Alignment Length:767 Identity:166/767 - (21%)
Similarity:253/767 - (32%) Gaps:229/767 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NYFQNWAARRRTAKVAKIRRKQRKCDKAFVPLQSSAKRAKTKENSVDSNTSVFSSSSSSSSGRSF 95
            :|.:..|::|.....|.:      ||::|    ::....:....|:.|.|...|.|.|:|||.|.
  Fly   428 DYCKRTASQRTAVDEALV------CDESF----NTHSLEQHDSYSLGSGTGSASGSGSASSGISA 482

  Fly    96 GR--GTERWAVGAEAGRGTAENETLAVA---AAAATTTNAGRFITADLIKTVNSDKQRDRVAKGH 155
            ||  |..|        .|..:|..|..|   ....|.|..|..:..|.....|.|  .:.|.|..
  Fly   483 GRHCGPVR--------PGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHD--FELVPKSL 537

  Fly   156 RDAKN---------------PLDATKHLRLSDC-LRTVQKLAIELESADAGSDASAQANASADAS 204
            ..|.|               |.::...|.|... ||.:...|...::...|........::....
  Fly   538 WKALNRWYGDNLPLPRQVIQPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGG 602

  Fly   205 SAVMSETGCRHYQSYVKEHSYDTFRVID---------AYFAACVNRDARERKAIHCNCFECGSYG 260
            ..|::..|           .|....|..         ||.|| .:|.|..|:.            
  Fly   603 YGVLASGG-----------GYAAIAVSSVLQPPKRYLAYTAA-FSRLATVRQV------------ 643

  Fly   261 IQLYACLHCIYFGCRGAHITSHLRSKKHNVAL----ELSHGTLYCYACRDFIYDARSREYALI-- 319
                           |..:...||.|..::.|    :|.:|.:....      ||...:..||  
  Fly   644 ---------------GEFLCEQLRLKSEDIRLWHVPQLDNGAILLEE------DAMCLKELLIRD 687

  Fly   320 NRKLEAKDLQKSIGWVPWVPTTKETNLLLANA-----------RRRLVRPN----QTIGLRGLLN 369
            |.:|..:...|.:.|       .|....||.|           ||||.|.:    ...|..||.|
  Fly   688 NDQLLLEIRNKDLTW-------PEELGSLATAQCGQGAGTPGDRRRLTRSSIMSVHAPGATGLHN 745

  Fly   370 LGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKC-----LVCEVSRLFQEFYSGSRSPLS 429
            ||.|||||..:|.|.:|..|:.||..:.|.....:::|.     |....:.|.:|.::.:...::
  Fly   746 LGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVA 810

  Fly   430 LHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHR--HCVKAKAEHESKSNSSGSGSGTNSSNS 492
            ..:|...:..:|...||..|.|:.|.....||.||.  :.|..|...|.| :|:|......::.:
  Fly   811 PLKLRFCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELK-DSNGRPDKIVAAEA 874

  Fly   493 SSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL----------------GE 541
            .|.| :.:...||..:|.|.|:|.|.|..|...|..:|||..:||.|                |.
  Fly   875 WSQH-HARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILLDGS 938

  Fly   542 TTTHGGVTPKTLIDCLERYTRAEH--------------------------LGSAAKIKCSTCKS- 579
            .....|....:  ||  :|:..:|                          |....|::..:.|. 
  Fly   939 VPIKYGFRLNS--DC--KYSHLKHKLSTMCSLPPNLMLVCELWNSQIRQVLNDDEKLRTQSAKEL 999

  Fly   580 YQESTKQFSLRTLP-SVVSFHLKR-----FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGD 638
            |.....:.|:||.. |.:|.|:::     ...||||.....|                       
  Fly  1000 YVYQLPEQSMRTRSNSGLSMHIEQGLKDIQRSSALITSAQDS----------------------- 1041

  Fly   639 FRFSLYAVVNHVGTIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEG 690
                    ::.:.|:.|.      .|:..:.|.|:.||       ..||.||
  Fly  1042 --------LSSLSTLQTS------SHRASSRVLCNGHV-------SGLDVEG 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464 7/60 (12%)
Peptidase_C19D 365..696 CDD:239125 88/382 (23%)
Usp32NP_001262074.2 EFh_PI-PLC 198..>251 CDD:333715
EF-hand motif 198..222 CDD:320029
EF-hand_7 227..290 CDD:463900
UBP12 486..>1002 CDD:227847 125/583 (21%)
Peptidase_C19 <1480..1737 CDD:470612
Blue background indicates that the domain is not in the aligned region.

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