DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and USP17L1

DIOPT Version :9

Sequence 1:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001243802.1 Gene:USP17L1 / 401447 HGNCID:37182 Length:530 Species:Homo sapiens


Alignment Length:375 Identity:104/375 - (27%)
Similarity:171/375 - (45%) Gaps:62/375 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PTTKETNLLLAN-----ARRRLVRPNQTIGLR-------GLLNLGATCFMNCIVQALVHTPLLSD 184
            |.:.||.:.|.:     ||:...|....:..|       ||.|:|.||:.|..:|.|.:|..|::
Human    42 PLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLAN 106

  Fly   185 YFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGY---EQQDAH 246
            |.:|..|....:....|::|.:.         :....:||...|:|.......||:   :|:|.|
Human   107 YMLSREHSQTCQRPKCCMLCTMQ---------AHITWALHSPGHVIQPSQALAAGFHRGKQEDVH 162

  Fly   247 EFFIATLDVLHRHCVKA--KAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSD 309
            ||.:.|:|.:.:.|:..  :.:|..|..:                       :|.|||.|..:|.
Human   163 EFLMFTVDAMKKACLPGHKQVDHHCKDTT-----------------------LIHQIFGGCWRSQ 204

  Fly   310 VVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQ 374
            :.|..|:|:|.|:||:.||:||:        ...:::...||:..:.|.|.......|..|....
Human   205 IKCLHCHGISDTFDPYLDIALDI--------QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRA 261

  Fly   375 ESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAV 439
            .::...:|.|...|:...||||  |.:...|::..:|:|...||.|:||::..  |...:.||||
Human   262 PASNTLTLHTSAKVLILVLKRF--SDVAGNKLAKNVQYPECLDMQPYMSQQNT--GPLVYVLYAV 322

  Fly   440 VNHVG-TIDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 488
            :.|.| :...|||.:||:.|:..|.|.||..:|:.|:..||..:.|:|||
Human   323 LVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 97/344 (28%)
USP17L1NP_001243802.1 Peptidase_C19E 79..373 CDD:239126 96/338 (28%)
UCH 80..372 CDD:278850 94/335 (28%)
HABP4_PAI-RBP1 <426..454 CDD:282609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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