Protein Alignment not and Usp5

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001246589.1
• Gene: Usp5 / 38375
• FlyBaseID: FBgn0035402
• Length: 827
• Species: Drosophila melanogaster
• Alignment Length: 634
• Identity: 107/634 - (16%)
• Similarity: 191/634 - (30%)
• Gaps: 263/634 - (41%)

  Fly    71 HITSHLRSKKHNVALELSHGTL--------YCYACRDFIYD----------------ARSREYAL 111
            |...|.|.....:|::|  ||:        :.|...:.:.|                .:..|.::
  Fly   237 HAVEHYRVTGFPLAVKL--GTITADGKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSM 299

  Fly   112 INRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQAL 176
            :..:|   |:.:.||  .|...|:..:.|         :|....|..|:.|||.:|::|.::|.|
  Fly   300 VELEL---DINQRIG--EWTALTESESEL---------QPVAGPGYTGMRNLGNSCYINSVMQVL 350

  Fly   177 VHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEF-------------------YSGSRSPLS 222
            ...|.....|:.    .|::           |.|:||                   .||..|.::
  Fly   351 FVIPDFQQRFVG----TGAE-----------RYFKEFPSDPANDFNIQMAKLGTGLQSGKYSSIA 400

  Fly   223 LHRL-------------LHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHC-------------- 260
            .:.|             .:::..:....:..:||||::|::..|.:|.|:.
  Fly   401 ENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLTLLDRNSRNQTNPADALKFLL 465

  Fly   261 ---VKAKAEHESKSNSSGSGS---------GTN-------SSNSSSSHCYGQ------------- 293
               |:..|.|:.|.|:....|         .||       .....::...||
  Fly   466 EDRVECLASHKVKYNTREEYSFRLPVPLDKATNLDEVREFQERKKAARETGQRLPDRDIVRHKVP 530

  Fly   294 -CNC--------IIDQIFTGMLQSDVVCQACNGVST------------TYDPFW-----DIS--- 329
             ..|        :|:|.::..:.|....:....::|            |....|     |:|
  Fly   531 LQACLERFFGPELIEQFYSTAIGSKTNARKITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDM 595

  Fly   330 ---LDLGETTTHGGVTPKTLIDCLERYTRAEHLGSAA--KIKCS-----------------TCKS 372
               |||....:.||:.|           ..|.|...|  ::|.:                 .||.
  Fly   596 PDELDLSNWRSAGGLQP-----------GEEALPEPATEEVKFAFDEAVMSELLTMGFPPEACKR 649

  Fly   373 YQESTKQFSLRTLPSVVSFHLKRFE--------HSALIDRKISSFIQFPVEFDM----------- 418
            ....||...|....:.:..|:...:        ::::.|...:.|:..|....|
  Fly   650 ACYHTKNSGLEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPESLAMLMSMGFDERQA 714

  Fly   419 -------------------------------------------TPFMSEKKNAYGDFRFSLYAVV 440
                                                       ||..:..::..|.:|  |.|.:
  Fly   715 VAALKATDGNVERATDWIFSHADSIGVEDAAPAANSSAAAASSTPNKTNYRDGRGKYR--LVAFI 777

  Fly   441 NHVGT-IDTGHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 488
            :|:|| ...|||..::| :|..||..:|..:  |..:......|||..|
  Fly   778 SHMGTSAQVGHYVCHIR-KKGEWVIFNDSKV--AKSQNPPKDLGYLYLY 823

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	8/39 (21%)
		Peptidase_C19D	158..489	CDD:239125	88/523 (17%)
Usp5	NP_001246589.1	UBP14	24..825	CDD:227532	107/634 (17%)
		zf-UBP	204..278	CDD:280334	9/42 (21%)
		Peptidase_C19B	333..823	CDD:239123	87/520 (17%)
		UBA1_UBP5_like	631..674	CDD:270480	6/42 (14%)
		UBA2_UBP5	696..737	CDD:270569	2/40 (5%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456862
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840