DRSC/TRiP Functional Genomics Resources

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Protein Alignment not and USP50

DIOPT Version :10

Sequence 1:NP_001401041.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_987090.2 Gene:USP50 / 373509 HGNCID:20079 Length:334 Species:Homo sapiens


Alignment Length:326 Identity:93/326 - (28%)
Similarity:144/326 - (44%) Gaps:62/326 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRH------DCGSKSSHKCLVCEVSRLFQEFY 421
            |:.||.|||.||.:|.|.|.|.....|.:||::.::      ||..      :....:.|..:.:
Human    42 GVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQNDCSE------VATAFAYLMTDMW 100

  Fly   422 SGSRSPLSLHRLLHLIWNHAKHLAGYE------QQDAHEFFIATLDVLHRHCVKAKAEHESKSNS 480
            .|....:|    ..:.|:...:|  |.      ||||.||.|..|:.||.   ..|..|.|:..|
Human   101 LGDSDCVS----PEIFWSALGNL--YPAFTKKMQQDAQEFLICVLNELHE---ALKKYHYSRRRS 156

  Fly   481 SGSGSGTNSSNSSSSHCYGQC-------NCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLD 538
            ...|        |:..|   |       ..||.|:|...|...:||..|...:...:.|...||.
Human   157 YEKG--------STQRC---CRKWITTETSIITQLFEEQLNYSIVCLKCEKCTYKNEVFTVFSLP 210

  Fly   539 LGETTTHGGVTPK----TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFH 599
            :          |.    :|.|||:.:.:.:.|....:|.||.|::.||:..:.|:...|.::.||
Human   211 I----------PSKYECSLRDCLQCFFQQDALTWNNEIHCSFCETKQETAVRASISKAPKIIIFH 265

  Fly   600 LKRFEHSALIDRKISSFIQFPV-EFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDTGHYTAYVR 663
            ||||:......||:.:.|.:|: ..|:||::......|.  :::|.|||||.|.:|.|||||:.:
Human   266 LKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICSIFRKYP--KYNLCAVVNHFGDLDGGHYTAFCK 328

  Fly   664 H 664
            :
Human   329 N 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
notNP_001401041.1 zf-UBP 253..310 CDD:460464
Peptidase_C19D 365..696 CDD:239125 92/324 (28%)
USP50NP_987090.2 UCH 44..329 CDD:425685 92/322 (29%)
Blue background indicates that the domain is not in the aligned region.

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