Protein Alignment not and Usp3

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001020595.2
• Gene: Usp3 / 363084
• RGDID: 1308852
• Length: 520
• Species: Rattus norvegicus
• Alignment Length: 487
• Identity: 146/487 - (29%)
• Similarity: 228/487 - (46%)
• Gaps: 64/487 - (13%)

  Fly    44 CNCFECGSYGIQLYACLHCIYFGCRGAHITSHLRSKK-----HNVALELSHGTLYCYACRDFIYD 103
            |:...||.| :..:|..|   :......:.:|.||:|     |.|.::.|..:.|||.|.||:
  Rat    44 CSSVHCGRY-VNGHAKKH---YEDAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV-- 102

  Fly   104 ARSREYALINRKLE-AKDLQKSIGWVPWVPTTKETNLLLANA--RRRLVRPN---QTIGLRGLLN 162
            ....:..|:.:..| .::|:.|    .:.........||.|:  ..:|::.|   ..|...||.|
  Rat   103 VNDTKLGLVQKVREHLQNLENS----AFTADRHRKRKLLENSSLNSKLLKVNGSTAAICATGLRN 163

  Fly   163 LGATCFMNCIVQALVHTPLLSDYF-------MSDRHDCGSKSSHK--------CLVCEVSRLFQE 212
            ||.|||||.|:|:|.:......||       :.:....|.::.|.        .||.|..:....
  Rat   164 LGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCA 228

  Fly   213 FYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSG-S 276
            .:.||::..|...|.:::|....:..||:|||||||....||.||.         |.:...:| |
  Rat   229 LWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHL---------ELQGGFNGVS 284

  Fly   277 GSGTNSSNSSSSH----CYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDL----- 332
            .|.....||:.|.    |....:.::..||.|:||::|.|..|...|..:|||.|:|||:
  Rat   285 RSAILQENSTLSANNKCCINGASTVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFR 349

  Fly   333 ---GETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLK 394
               .:...:|.|.  :|.|||..:|..|.|.......|..||..|:|||:|.::.||..:..|||
  Rat   350 SKRSKNQENGPVC--SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLK 412

  Fly   395 RFEHSALIDRKISSFIQFPVE-FDMTPFMSEKKNAYGD-FRFSLYAVVNHVGT-IDTGHYTAYVR 456
            ||..:|.:..|:.:::|||:. .||..::.|.:|:..| ..:.|.|||.|.|: :.:||||||..
  Rat   413 RFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAV 477

  Fly   457 HQKDTWVKCDDHVITMASLKQVLDSEGYLLFY 488
            |: ..|...:|..:|:...:.|..::.|:|||
  Rat   478 HE-GRWFHFNDSTVTVTDEETVGKAKAYILFY 508

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	18/61 (30%)
		Peptidase_C19D	158..489	CDD:239125	117/362 (32%)
Usp3	NP_001020595.2	zf-UBP	29..105	CDD:396634	19/66 (29%)
		UCH	159..508	CDD:395355	115/360 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1867
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D929408at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820