Protein Alignment not and Usp34

DIOPT Version :9

• Sequence 1: NP_001287106.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_038948159.1
• Gene: Usp34 / 360990
• RGDID: 1565181
• Length: 3584
• Species: Rattus norvegicus
• Alignment Length: 614
• Identity: 116/614 - (18%)
• Similarity: 207/614 - (33%)
• Gaps: 206/614 - (33%)

  Fly     1 MSETGCRHY---------QSYVKEHSYDTFRVIDA---YFAACVNRDARERKAI----------- 42
            |.:.||:.|         ..::|:.|..|...:||   :.|.|:    |.|:.:
  Rat  1767 MLKPGCKEYFWLLCKLVDNIHIKDASQTTLLDLDALARHLADCI----RSREILDHLDGNLEDDG 1827

  Fly    43 -------------HCNCFECGSYGIQLYACLHCIYF------GCRGAHITSH-LRSKKHNVALEL 87
                         |...|:....|.:....:..:.|      ..|.....|| .|:..:::.:|:
  Rat  1828 LSGLLRLATSVIKHKPPFKFSREGQEFLRDVFNLLFLLPSLKDRRQPKCKSHSSRAAAYDLLVEM 1892

  Fly    88 SHGTLYCYACRDFIYDARSREYALINRKLEAKDLQKSIGWVPWVPTTKETNLLLANARRRLVRPN 152
            ..|::              ..|.|::..:.|:.:|.:.....|.....|.    ..|..|.|
  Rat  1893 VKGSV--------------ENYRLVHNWVMAQHMQSAHAPYKWDYWPHED----VRAECRFV--- 1936

  Fly   153 QTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQ------ 211
                  ||.||||||::...:|.|...|.......:.::....|  ||..:.|:.::|.
  Rat  1937 ------GLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSEDMK--HKTTLLELQKMFTYLMESE 1993

  Fly   212 ----------EFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAE 266
                      :.|:..:.||:..                ||:|..|||   .|::      .|.|
  Rat  1994 CKAYNPRPFCKTYTMDKQPLNTG----------------EQKDMTEFF---TDLI------TKVE 2033

  Fly   267 HESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLD 331
            ..|.                      :....:..:|.|::.::||...|..||.|.:.|:.:...
  Rat  2034 EMSP----------------------ELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQ 2076

  Fly   332 LGETTTHGGVTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR- 395
            :.:.        |.:.:.|:..|..:.|.......||.|.....:.|:...:.||.::||:..|
  Rat  2077 VADM--------KNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRY 2133

  Fly   396 -FEHSALIDRKISSFIQFPVEFDMTPF-------MSEKKNAYGD----------FRFSLYAVVNH 442
             |....::..|:::...||:..||||:       .|::|..:.|          :.:.|..|..|
  Rat  2134 TFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKSDRKEGFKDVGDHSKDTESYEYDLIGVTVH 2198

  Fly   443 VGTIDTGHYTAYVR-------HQKDTWV-----------------KCDDHVITMASLKQVLDS-- 481
            .||.|.|||.:::|       ::.:.|.                 :|....:|..:...|.|.
  Rat  2199 TGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQLASECFGGEMTTKTYDSVTDKFM 2263

  Fly   482 --------EGYLLFY------HKNVLEYE 496
                    ..|:|||      .:|..||:
  Rat  2264 DFSFEKTHSAYMLFYKRMEPEEENGREYK 2292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
not	NP_001287106.1	zf-UBP	46..103	CDD:307999	9/63 (14%)
		Peptidase_C19D	158..489	CDD:239125	81/405 (20%)
Usp34	XP_038948159.1	peptidase_C19C	1934..2283	CDD:239124	83/414 (20%)
		DUF3517	2401..2734	CDD:403300

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910